A Simple Solution for Oligonucleotide Design



Click here for a list of viruses in the database


Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

Tm:
°C± °C
Oligo length:
bp± bp



PMID:

Common Data ID:

Taxonomy ID:

GI Number:

Total 49 Oligos

Common Data ID: AM0017 Virus: Bovine adenovirus, BAV; Ovine adenovirus, OAV; Porcine adenovirus, PAV
PMID: 8908748Publication date:04/96 Type: PCR
Temp: 94C 9.5min>(94C 30sec>55C 30sec>72C 30sec)*35>72C 4.5min
Primer Name: HexAdB Type of Usage: PCRTm: Max Tm 82.1 C Min Tm 78.8 C at salt 1000.0mM
Primer Name: HexAdJ Type of Usage: PCRTm: Max Tm 82.2 C Min Tm 75 C at salt 1000.0mM
Primer Name: HexAA1913 Type of Usage:
Tm: 80.4 C at salt 1000.0mM
Primer Name: Type of Usage: PCRTm: Max Tm 82.2 C Min Tm 75 C at salt 1000.0mM

Common Data ID: BM1300 Virus: bovine adenovirus; goat adenovirus 1; porcine adenovirus
PMID: 8908748Publication date:04/96 Type: Univesal PCR
Temp: 94C 10min>(94C 30sec>55C 30sec>72C 30sec)*35>72C 5min
Primer Name: HexAdB Type of Usage: Tm: Max Tm 82.1 C Min Tm 78.8 C at salt 1000.0mM
Primer Name: HexAdJ Type of Usage: Tm: Max Tm 82.2 C Min Tm 75 C at salt 1000.0mM

Common Data ID: SG0008 Virus: Bovine adenovirus 2
PMID: 12837557Publication date:2004 Type: PCR
Temp: 94C 120sec>(94C 30sec>55C 60sec>72C 60sec)*40>72C 600sec
Primer Name: G1 Type of Usage: Forward PrimerTm: 74.1C at salt 1000.0 mM
Primer Name: G1 Type of Usage: Forward PrimerTm: 74.1C at salt 1000.0 mM
Primer Name: R2 Type of Usage: Reverse PrimerTm: 76.1C at salt 1000.0 mM
Primer Name: R2 Type of Usage: Reverse PrimerTm: 76.1C at salt 1000.0 mM
Primer Name: R1 Type of Usage: Reverse PrimerTm: 72C at salt 1000.0 mM
Primer Name: G2 Type of Usage: Forward PrimerTm: 65.9C at salt 1000.0 mM

Common Data ID: SG0032 Virus: Bovine adenovirus 4
PMID: 15006765Publication date:03/04 Type: Nested PCR
Temp: 94C 240sec>(92C 60sec>55C 60sec>72C 75sec)*29>72C 420sec
Primer Name: BALF Type of Usage: Forward PrimerTm: 69.1C at salt 1000.0 mM
Primer Name: BARF Type of Usage: Reverse PrimerTm: 76.4C at salt 1000.0 mM
Primer Name: Pr-BALN Type of Usage: Forward PrimerTm: max Tm 73.2C min Tm 71.5C at salt 1000.0mM
Primer Name: Pr-BALF Type of Usage: Forward PrimerTm: 77.2C at salt 1000.0 mM
Primer Name: Pr-BARF Type of Usage: Reverse PrimerTm: max Tm 71.9C min Tm 70.2C at salt 1000.0mM
Primer Name: BALN Type of Usage: Forward PrimerTm: 69.5C at salt 1000.0 mM
Primer Name: Pr-BARN Type of Usage: Reverse PrimerTm: max Tm 65C min Tm 63.3C at salt 1000.0mM
Primer Name: BARN Type of Usage: Reverse PrimerTm: max Tm 69.7C min Tm 66.1C at salt 1000.0mM

Common Data ID: SK0058 Virus: Bovine adenovirus type 3, BAV3
PMID: 10423142Publication date:07/99 Type: RT-PCR
Temp: (95C 1min>45C 1.5min>72C 3min)*33
Primer Name: AB2646 Type of Usage: Tm: 50 C
Primer Name: AB2647 Type of Usage: Tm: 50 C
Primer Name: AB2820 Type of Usage: Tm: 50 C
Primer Name: AB2953 Type of Usage: Tm: 48 C
Primer Name: AB2977 Type of Usage: Tm: 58 C
Primer Name: AB3107 Type of Usage: Tm: 52 C
Primer Name: AB6220 Type of Usage: Tm: 56 C
Primer Name: AB6221 Type of Usage: Tm: 54 C
Primer Name: AB3822 Type of Usage: Tm: 67.3 C at salt 1000.0mM

Common Data ID: YS0012 Virus: Bovine adenovirus B
PMID: 14624234Publication date:11/17/2003 Type: Hybridization
Temp:
Primer Name: 10007159 Type of Usage: Tm: 95.19C at salt 1000.0 mM
Primer Name: 10007160 Type of Usage: Tm: 95.19C at salt 1000.0 mM
Primer Name: 10007161 Type of Usage: Tm: 99.87C at salt 1000.0 mM
Primer Name: 10007162 Type of Usage: Tm: 99.87C at salt 1000.0 mM
Primer Name: 10007163 Type of Usage: Tm: 99.29C at salt 1000.0 mM
Primer Name: 10007164 Type of Usage: Tm: 99.29C at salt 1000.0 mM
Primer Name: 10007165 Type of Usage: Tm: 93.43C at salt 1000.0 mM
Primer Name: 10007166 Type of Usage: Tm: 93.43C at salt 1000.0 mM
Primer Name: 10007167 Type of Usage: Tm: 97.53C at salt 1000.0 mM
Primer Name: 10007168 Type of Usage: Tm: 97.53C at salt 1000.0 mM
Primer Name: 10007243 Type of Usage: Tm: 87.57C at salt 1000.0 mM
Primer Name: 10007244 Type of Usage: Tm: 87.57C at salt 1000.0 mM
Primer Name: 10007245 Type of Usage: Tm: 85.81C at salt 1000.0 mM
Primer Name: 10007246 Type of Usage: Tm: 85.81C at salt 1000.0 mM
Primer Name: 10007247 Type of Usage: Tm: 90.5C at salt 1000.0 mM
Primer Name: 10007248 Type of Usage: Tm: 90.5C at salt 1000.0 mM
Primer Name: 10007249 Type of Usage: Tm: 84.64C at salt 1000.0 mM
Primer Name: 10007250 Type of Usage: Tm: 84.64C at salt 1000.0 mM
Primer Name: 10007251 Type of Usage: Tm: 85.81C at salt 1000.0 mM
Primer Name: 10007252 Type of Usage: Tm: 85.81C at salt 1000.0 mM

Total 49 Oligos
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