A Simple Solution for Oligonucleotide Design



Click here for a list of viruses in the database


Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

Tm:
°C± °C
Oligo length:
bp± bp



PMID:

Common Data ID:

Taxonomy ID:

GI Number:

Total 44 Oligos

Common Data ID: BH0003 Virus: Alcelaphine herpesvirus 1, AHV-1
PMID: 2241575Publication date:1990 Type: PCR
Temp: (92C 1min>62C 1min>72C 2min)*30
Primer Name: PN00065 Type of Usage: Tm: 75.2 C at salt 1000.0mM
Primer Name: PN00066 Type of Usage: Tm: 79.3 C at salt 1000.0mM

Common Data ID: BH0004 Virus: Alcelaphine herpesvirus 1, AHV-1
PMID: 7858018Publication date:10/94 Type: PCR
Temp: (94C 1min>55C 1min>72C 3min)*35>72C 10min
Primer Name: A Type of Usage: Tm: 79.3 C at salt 1000.0mM
Primer Name: B Type of Usage: Tm: 79.3 C at salt 1000.0mM
Primer Name: PN00089 Type of Usage: Tm: 80.5 C at salt 1000.0mM

Common Data ID: BH0007 Virus: Alcelaphine herpesvirus 1, AHV1
PMID: 7979973Publication date:1994 Type: PCR
Temp: 95C 2min>(95C 1min>56C 2min>74C 2min)*30>74C 10min
Primer Name: B2.1 Type of Usage: Tm: 70 C at salt 1000.0mM
Primer Name: B2.2 Type of Usage: Tm: 72 C at salt 1000.0mM
Primer Name: B2.b Type of Usage: Tm: 75.3 C at salt 1000.0mM

Common Data ID: BH0008 Virus: Alcelaphine herpesvirus 1, AHV-1
PMID: 8600434Publication date:06/95 Type: Nested PCR
Temp: 97C 3min>62C 0sec>72C 1min>(93C 40sec>62C 30sec>72C 60sec)*33>72C 5min
Primer Name: MC1 Type of Usage: Tm: 77.3 C at salt 1000.0mM
Primer Name: MC2 Type of Usage: Tm: 77.3 C at salt 1000.0mM

Common Data ID: BH0066 Virus: Alcelaphine herpesvirus 1, AHV-1; Alcelaphine herpesvirus 2, AHV-2
PMID: 7933281Publication date:07/94 Type: Universal PCR
Temp: (94C 0.5min>50C 1min>70C 5min)*34>72C 10min
Primer Name: BH00660 Type of Usage: HybridizationTm: 80.5 C at salt 1000.0mM
Primer Name: A Type of Usage: Tm: 79.3 C at salt 1000.0mM
Primer Name: B Type of Usage: Tm: 79.3 C at salt 1000.0mM

Common Data ID: MP0021 Virus: Alcelaphine herpesvirus 1, AHV-1
PMID: 1911989Publication date:07/91 Type: Nested PCR 1
Temp: 94C 7min>(94C 60sec>62C 30sec>72C 75sec)*35>72C 7min
Primer Name: MP00211 Type of Usage: PCRTm: 80.5 C at salt 1000.0mM
Primer Name: MP00212 Type of Usage: PCRTm: 74.4 C at salt 1000.0mM

Common Data ID: MP0022 Virus: Alcelaphine herpesvirus 1, AHV-1
PMID: 1911989Publication date:07/91 Type: Nested PCR 2
Temp: 94C 7min>(94C 60sec>62C 30sec>72C 75sec)*35>72C 7min
Primer Name: MP00221 Type of Usage: PCRTm: 78.8 C at salt 1000.0mM
Primer Name: MP00222 Type of Usage: PCRTm: 77 C at salt 1000.0mM

Common Data ID: MP0915 Virus: Alcelaphine herpesvirus 1, AlHV-1; Alcelaphine herpesvirus 2, AlHV-2
PMID: 12202582Publication date:09/02 Type: Nested PCR
Temp: (94C 30sec>47C 30sec>72C 20sec)*30>72C 7min
Primer Name: PM00578 Type of Usage: Tm: 65 C at salt 1000.0mM
Primer Name: PM00579 Type of Usage: Tm: 50 C

Common Data ID: SG0006 Virus: Alcelaphine herpesvirus 1
PMID: 12208112Publication date:2002 Type: PCR
Temp: 95C 5min>(94C 1min>45C 1min>72C 1min)*24>94C 1min>45C 1min>72C 5min
Primer Name: POL-1 Type of Usage: Forward PrimerTm: 80.4C at salt 1000.0 mM
Primer Name: POL2 Type of Usage: Reverse PrimerTm: 64.6C at salt 1000.0 mM
Primer Name: POL2 Type of Usage: Reverse PrimerTm: 64.6C at salt 1000.0 mM
Primer Name: AIHV-POL Type of Usage: Forward PrimerTm: 65.9C at salt 1000.0 mM

Common Data ID: SG0010 Virus: Alcelaphine herpesvirus 1
PMID: 14656465Publication date:2004 Type: Nested PCR
Temp: (94C 45sec>63C 45sec>72C 90sec)*25>(94C 45sec>63C 45sec>60sec)*30>72C 600sec
Primer Name: BOG3 Type of Usage: Forward PrimerTm: 72.5C at salt 1000.0 mM
Primer Name: BoGe Type of Usage: Reverse PrimerTm: 76.1C at salt 1000.0 mM
Primer Name: B3up Type of Usage: Forward PrimerTm: 73.6C at salt 1000.0 mM
Primer Name: B3low Type of Usage: Reverse PrimerTm: 71.5C at salt 1000.0 mM

Common Data ID: YS0012 Virus: Alcelaphine herpesvirus 1
PMID: 14624234Publication date:11/17/2003 Type: Hybridization
Temp:
Primer Name: 20001590 Type of Usage: Tm: 89.33C at salt 1000.0 mM
Primer Name: 20001591 Type of Usage: Tm: 96.94C at salt 1000.0 mM
Primer Name: 20001592 Type of Usage: Tm: 95.19C at salt 1000.0 mM
Primer Name: 20001677 Type of Usage: Tm: 91.67C at salt 1000.0 mM
Primer Name: 20001678 Type of Usage: Tm: 90.5C at salt 1000.0 mM
Primer Name: 20001679 Type of Usage: Tm: 89.91C at salt 1000.0 mM
Primer Name: 20001680 Type of Usage: Tm: 93.43C at salt 1000.0 mM
Primer Name: 20001681 Type of Usage: Tm: 93.43C at salt 1000.0 mM
Primer Name: 20001682 Type of Usage: Tm: 94.01C at salt 1000.0 mM
Primer Name: 20001683 Type of Usage: Tm: 93.43C at salt 1000.0 mM
Primer Name: 20001684 Type of Usage: Tm: 92.26C at salt 1000.0 mM
Primer Name: 20001685 Type of Usage: Tm: 91.67C at salt 1000.0 mM
Primer Name: 20001686 Type of Usage: Tm: 88.16C at salt 1000.0 mM
Primer Name: 20001687 Type of Usage: Tm: 92.26C at salt 1000.0 mM
Primer Name: 20001688 Type of Usage: Tm: 92.26C at salt 1000.0 mM
Primer Name: 10004203 Type of Usage: Tm: 93.43C at salt 1000.0 mM
Primer Name: 10004204 Type of Usage: Tm: 93.43C at salt 1000.0 mM

Total 44 Oligos
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