A Simple Solution for Oligonucleotide Design



Click here for a list of viruses in the database


Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

Tm:
°C± °C
Oligo length:
bp± bp



PMID:

Common Data ID:

Taxonomy ID:

GI Number:

Total 284 Oligos

Common Data ID: BH0056 Virus: Foot-and-mouth disease virus O, FMDV
PMID: 8391540Publication date:04/93 Type: RT-PCR
Temp: 100C 2min>(94C 30sec>60C 30sec>72C 120sec)*30
Primer Name: P1 Type of Usage: PCRTm: 80.3 C at salt 1000.0mM
Primer Name: P2 Type of Usage: Tm: 75.3 C at salt 1000.0mM
Primer Name: P3 Type of Usage: Tm: 74.1 C at salt 1000.0mM

Common Data ID: BM0285 Virus: Foot-and-mouth disease virus (strain O1); Swine vesicular disease virus (STRAIN UKG/27/72); Encephalomyocarditis virus (Belgian isolate 2887A); bovine viral diarrhea virus (isolate NADL)
PMID: 8634024Publication date:1996 Type: Multiplex PCR
Temp: 95C 1min>(95C 15sec>60C 60sec)*35>60C 6min
Primer Name: P33 Type of Usage: Tm: 74.1 C at salt 1000.0mM
Primer Name: P32 Type of Usage: Tm: 74.1 C at salt 1000.0mM
Primer Name: P7 Type of Usage: Tm: 74.7 C at salt 1000.0mM
Primer Name: P23 Type of Usage: Tm: 56 C
Primer Name: P5 Type of Usage: Tm: 80.4 C at salt 1000.0mM
Primer Name: P6 Type of Usage: Tm: 78.5 C at salt 1000.0mM
Primer Name: P25 Type of Usage: Tm: 78.3 C at salt 1000.0mM
Primer Name: P26 Type of Usage: Tm: 74.1 C at salt 1000.0mM

Common Data ID: BM0286 Virus: Foot-and-mouth disease virus (strain A24 Cruzeiro); foot-and-mouth disease virus C3, Resende; Foot-and-mouth disease virus (strain O1), BFS 1967; Foot-and-mouth disease virus Asia 1, Ind 9/89; Foot-and-mouth disease virus SAT 2, Knp 5/91/2
PMID: 8634024Publication date:1996 Type: Multiplex PCR
Temp: 95C 1min>(95C 15sec>60C 60sec)*35>60C 6min
Primer Name: P87 Type of Usage: Tm: 78.7 C at salt 1000.0mM
Primer Name: P88 Type of Usage: Tm: 77 C at salt 1000.0mM
Primer Name: P89 Type of Usage: Tm: 78.7 C at salt 1000.0mM
Primer Name: P90 Type of Usage: Tm: 77 C at salt 1000.0mM
Primer Name: P91 Type of Usage: Tm: 77 C at salt 1000.0mM
Primer Name: P92 Type of Usage: Tm: 75.3 C at salt 1000.0mM
Primer Name: P40 Type of Usage: Tm: 70.5 C at salt 1000.0mM
Primer Name: p38 Type of Usage: Tm: 56 C
Primer Name: P74 Type of Usage: Tm: 80.2 C at salt 1000.0mM
Primer Name: P33 Type of Usage: Tm: 74.1 C at salt 1000.0mM

Common Data ID: BM0287 Virus: Foot-and-mouth disease virus (strain A24 Cruzeiro); foot-and-mouth disease virus C3, Resende; Foot-and-mouth disease virus (strain O1), BFS 1967; Foot-and-mouth disease virus Asia 1, Ind 9/89; Foot-and-mouth disease virus SAT 2, Knp 5/91/2
PMID: 8634024Publication date:1996 Type: Multiplex PCR
Temp: 95C 1min>(95C 15sec>60C 60sec)*35>60C 6min
Primer Name: P75 Type of Usage: Tm: 82.3 C at salt 1000.0mM
Primer Name: P76 Type of Usage: Tm: 78.2 C at salt 1000.0mM
Primer Name: P77 Type of Usage: Tm: 78.2 C at salt 1000.0mM
Primer Name: P55 Type of Usage: Tm: 72 C at salt 1000.0mM
Primer Name: P56 Type of Usage: Tm: 74.1 C at salt 1000.0mM
Primer Name: P57 Type of Usage: Tm: 70 C at salt 1000.0mM
Primer Name: P58 Type of Usage: Tm: 72 C at salt 1000.0mM
Primer Name: P59 Type of Usage: Tm: 70 C at salt 1000.0mM
Primer Name: P60 Type of Usage: Tm: 70 C at salt 1000.0mM

Common Data ID: BM0295 Virus: Foot-and-mouth disease virus A; Foot-and-mouth disease virus Asia 1; Foot-and-mouth disease virus C; Foot-and-mouth disease virus O; Foot-and-mouth disease virus SAT 1; Foot-and-mouth disease virus SAT 2; Foot-and-mouth disease virus SAT 3
PMID: 9652063Publication date:1998 Type: Universal PCR
Temp: 50C 15min>94C 90sec>(94C 30sec>55C 30sec>72C 42sec)*35
Primer Name: 2B58 Type of Usage: Tm: 74.1 C at salt 1000.0mM
Primer Name: 1C608 Type of Usage: Tm: 74.1 C at salt 1000.0mM

Common Data ID: BM0296 Virus: Foot-and-mouth disease virus A; Foot-and-mouth disease virus Asia 1; Foot-and-mouth disease virus C; Foot-and-mouth disease virus O; Foot-and-mouth disease virus SAT 1; Foot-and-mouth disease virus SAT 2; Foot-and-mouth disease virus SAT 3
PMID: 9652063Publication date:1998 Type: RT-nested PCR
Temp: 50C 15min>94C 90sec>(94C 30sec>55C 30sec>72C 42sec)*35
Primer Name: 3D478 Type of Usage: Tm: 56 C
Primer Name: 3D400 Type of Usage: Tm: 58 C
Primer Name: 3D59 Type of Usage: Tm: 52 C
Primer Name: 3D206 Type of Usage: Tm: 56 C

Common Data ID: BM0306 Virus: Foot-and-mouth disease virus (strain C1-Santa Pau), FMDV C-S8 Sp70; Foot-and-mouth disease virus (strain O1), FMDV O1 Kb; Foot-and-mouth disease virus (strain A5), FMDV A5 Ww
PMID: 9694330Publication date:06/98 Type: RT-PCR
Temp: 93C 10min>(93C 1min>37C 1min>72C 2min)*30
Primer Name: 3D1 Type of Usage: Tm: 76.1 C at salt 1000.0mM
Primer Name: 3D2 Type of Usage: Tm: 75.8 C at salt 1000.0mM

Common Data ID: BM0309 Virus: Swine vesicular disease virus (isolate Spain1/93); Foot-and-mouth disease virus (strain C1-Santa Pau); Vesicular stomatitis New Jersey virus, VSV NJ; Vesicular stomatitis Indiana virus, VSV Ind
PMID: 9694330Publication date:06/98 Type: Multiplex RT-PCR
Temp: 93C 10min>(93C 1min>37C 1min>72C 2min)*30
Primer Name: 3D1 Type of Usage: Tm: 76.1 C at salt 1000.0mM
Primer Name: 3D2 Type of Usage: Tm: 75.8 C at salt 1000.0mM
Primer Name: SS4 Type of Usage: Tm: 71 C at salt 1000.0mM
Primer Name: SA3 Type of Usage: Tm: 76.6 C at salt 1000.0mM

Common Data ID: BM0325 Virus: Foot-and-mouth disease virus (strain A22/550 AZERBAIJAN 65); foot-and-mouth disease virus C1; Foot-and-mouth disease virus SAT 1; Foot-and-mouth disease virus SAT 2; Foot-and-mouth disease virus SAT 3; Foot-and-mouth disease virus Asia 1; Foot-and-mouth disease virus (strain O1)
PMID: 11101603Publication date:12/00 Type: RT-PCR
Temp: (95C 15sec>60C 60sec)*40
Primer Name: IRES2 Type of Usage: Tm: 74.4 C at salt 1000.0mM
Primer Name: IRES4 Type of Usage: Tm: 72.5 C at salt 1000.0mM

Common Data ID: BM0341 Virus: Foot-and-mouth disease virus (strain A22/550 AZERBAIJAN 65); Foot-and-mouth disease virus (strain A24 Cruzeiro); Foot-and-mouth disease virus Asia 1; foot-and-mouth disease virus C1; Foot-and-mouth disease virus SAT 2
PMID: 9694331Publication date:06/98 Type: RT-PCR
Temp: (93C 30sec>55C 2min>72C 5min)*30>72C 10min
Primer Name: 3C3 antisense Type of Usage: Tm: 72 C at salt 1000.0mM
Primer Name: 3C3 sense Type of Usage: Tm: 73.7 C at salt 1000.0mM

Common Data ID: BM0482 Virus: Foot-and-mouth disease virus (strain O1)
PMID: 1313822Publication date:03/92 Type: RT-PCR
Temp: (93C 30sec>55C 30sec>72C 60sec)*35>72C 9min
Primer Name: Oligo 2 Type of Usage: Tm: 71.5 C at salt 1000.0mM
Primer Name: Oligo 1 Type of Usage: Tm: 70 C at salt 1000.0mM

Common Data ID: BM0483 Virus: Foot-and-mouth disease virus (strain O1); Foot-and-mouth disease virus Asia 1
PMID: 1313822Publication date:03/92 Type: RT-PCR
Temp: (93C 30sec>55C 30sec>72C 60sec)*35>72C 9min
Primer Name: Oligo 2 Type of Usage: Tm: 71.5 C at salt 1000.0mM
Primer Name: Oligo 5 Type of Usage: Tm: 76.1 C at salt 1000.0mM

Common Data ID: BM0484 Virus: Foot-and-mouth disease virus (strain O1); Foot-and-mouth disease virus (strain A12)
PMID: 1313822Publication date:03/92 Type: RT-PCR
Temp: (93C 30sec>55C 30sec>72C 60sec)*35>72C 9min
Primer Name: Oligo 9 Type of Usage: Tm: 78.3 C at salt 1000.0mM
Primer Name: Oligo 7 Type of Usage: Tm: 70.5 C at salt 1000.0mM

Common Data ID: BM0489 Virus: Foot-and-mouth disease virus (strain C1-Santa Pau)
PMID: 8079512Publication date:06/94 Type: RT-PCR
Temp: (94C 1min>55C 1min>72C 2min)*30>72C 8min
Primer Name: PJ00326 Type of Usage: Tm: 72 C at salt 1000.0mM
Primer Name: PJ00327 Type of Usage: Tm: 70 C at salt 1000.0mM

Common Data ID: BM0490 Virus: Foot-and-mouth disease virus (strain O1); foot-and-mouth disease virus C1; Foot-and-mouth disease virus (strain A12); Foot-and-mouth disease virus (strain A5); Foot-and-mouth disease virus Asia 1
PMID: 1666635Publication date:Fall/91 Type: RT-PCR 1
Temp: (95C 30sec>55C 30sec>72C 30sec)*30
Primer Name: 1US Type of Usage: Tm: 76.1 C at salt 1000.0mM
Primer Name: 1DS Type of Usage: Tm: 78.2 C at salt 1000.0mM

Common Data ID: BM0492 Virus: Foot-and-mouth disease virus (strain O1); foot-and-mouth disease virus C1; Foot-and-mouth disease virus (strain A12); Foot-and-mouth disease virus (strain A5); Foot-and-mouth disease virus Asia 1
PMID: 1666635Publication date:Fall/91 Type: Southern blot hybridization
Temp: 42C 12hr
Primer Name: 1P Type of Usage: Tm: 80.3 C at salt 1000.0mM

Common Data ID: BM0499 Virus: Foot-and-mouth disease virus O; Foot-and-mouth disease virus (strain A24 Cruzeiro); Foot-and-mouth disease virus C; Foot-and-mouth disease virus Asia 1; Foot-and-mouth disease virus SAT 1; Foot-and-mouth disease virus SAT 2; Foot-and-mouth disease virus SAT 3
PMID: 10403677Publication date:06/99 Type: RT-nested PCR 2
Temp: 94C 60sec>(92C 30sec>60C 30sec>75C 90sec)*30>75C 5min
Primer Name: 3C2 Type of Usage: Tm: 74.1 C at salt 1000.0mM
Primer Name: 3B3 Type of Usage: Tm: 67.9 C at salt 1000.0mM

Common Data ID: BM0535 Virus: Foot-and-mouth disease virus (strain A24 Cruzeiro)
PMID: 10328832Publication date:05/99 Type: RT-PCR
Temp: (95C 10sec>60C 10sec)*5>(95C 0sec>60C 0sec>72C 5sec)*25
Primer Name: PJ00341 Type of Usage: Tm: 74.1 C at salt 1000.0mM
Primer Name: PJ00342 Type of Usage: Tm: 74.1 C at salt 1000.0mM

Common Data ID: BM0536 Virus: Foot-and-mouth disease virus A; Foot-and-mouth disease virus C; Foot-and-mouth disease virus O; Foot-and-mouth disease virus SAT 1; Foot-and-mouth disease virus SAT 2; Foot-and-mouth disease virus SAT 3
PMID: 9629589Publication date:03/98 Type: RT-PCR
Temp: 96C 60sec>(96C 12sec>49C 20sec>70C 40sec)*30
Primer Name: 2B Type of Usage: Tm: 74.1 C at salt 1000.0mM
Primer Name: P1 Type of Usage: Tm: 80.3 C at salt 1000.0mM
Primer Name: W-US Type of Usage: Tm: 67.9 C at salt 1000.0mM
Primer Name: VP1Ub Type of Usage: Tm: Max Tm 78.8 C Min Tm 77.2 C at salt 1000.0mM

Common Data ID: BM0546 Virus: Foot-and-mouth disease virus (strain A24 Cruzeiro); Foot-and-mouth disease virus Asia 1; foot-and-mouth disease virus C1; Foot-and-mouth disease virus O; Foot-and-mouth disease virus SAT 1; Foot-and-mouth disease virus SAT 2; Foot-and-mouth disease virus SAT 3
PMID: 8385843Publication date:1993 Type: RT-PCR
Temp: 95C 5min>(94C 1min>50C 1min>70C 2min)*30>70C 7min
Primer Name: P1 Type of Usage: Tm: 74.1 C at salt 1000.0mM
Primer Name: P2 Type of Usage: Tm: 80.3 C at salt 1000.0mM
Primer Name: TD1 Type of Usage: Tm: 84.2 C at salt 1000.0mM
Primer Name: TD2 Type of Usage: Tm: 74.1 C at salt 1000.0mM

Common Data ID: BM1829 Virus: Foot-and-mouth disease virus, FMDV
PMID: 12051502Publication date:06/02 Type: RT-PCR
Temp: 60C 10min>(95C 2sec>60C 30sec)*45
Primer Name: PM00247 Type of Usage: Tm: 71 C at salt 1000.0mM
Primer Name: PM00249 Type of Usage: Tm: 58 C
Primer Name: PM00250 Type of Usage: Tm: 78.2 C at salt 1000.0mM

Common Data ID: JP0024 Virus: Foot-and-mouth disease virus C
PMID: 11222004Publication date:02/01 Type: Hybridization
Temp: 42C Overnight
Primer Name: FMDV-2AR Type of Usage: Tm: 80.5 C at salt 1000.0mM
Primer Name: FMDV-3BR Type of Usage: Tm: 80.6 C at salt 1000.0mM
Primer Name: FMDV-3CR Type of Usage: Tm: 82 C at salt 1000.0mM
Primer Name: FMDV-3DR Type of Usage: Tm: 82.1 C at salt 1000.0mM

Common Data ID: JX0029 Virus: Foot-and-mouth disease virus (strain A5); foot-and-mouth disease virus C1; Foot-and-mouth disease virus (strain O1)
PMID: 7714205Publication date:02/95 Type: RT-PCR
Temp: (95C 15sec>55C 15sec>72C 45sec)*30
Primer Name: SV1 Type of Usage: Tm: 80.1 C at salt 1000.0mM
Primer Name: A2 Type of Usage: Tm: 67.9 C at salt 1000.0mM
Primer Name: P1 Type of Usage: Tm: 80.3 C at salt 1000.0mM

Common Data ID: JX0030 Virus: Foot-and-mouth disease virus (strain O1)
PMID: 11164915Publication date:03/01 Type: PCR
Temp: 50C 2min>95C 10min>(95C 15sec>60C 60sec)*50
Primer Name: SAIR 41F Type of Usage: Tm: 74.4 C at salt 1000.0mM
Primer Name: SAIR 172R Type of Usage: Tm: 74.4 C at salt 1000.0mM

Common Data ID: JX0031 Virus: Foot-and-mouth disease virus (strain O1)
PMID: 11164915Publication date:03/01 Type: Real-Time PCR
Temp: 50C 2min>95C 10min>(95C 15sec>60C 60sec)*50
Primer Name: SAIR 89F Type of Usage: Tm: 76.1 C at salt 1000.0mM
Primer Name: SAIR 151R Type of Usage: Tm: 56 C
Primer Name: SA-P-IR 110-131F Type of Usage: Tm: 80.3 C at salt 1000.0mM

Common Data ID: JX0049 Virus: Foot-and-mouth disease virus (strain O1)
PMID: 7822459Publication date:09/94 Type: nested RT-PCR1
Temp: (95C 1min>45C 2min>72C 2min)*30>72C 9min
Primer Name: P1 Type of Usage: Tm: 78.2 C at salt 1000.0mM
Primer Name: P3 Type of Usage: Tm: 74.1 C at salt 1000.0mM

Common Data ID: JX0050 Virus: Foot-and-mouth disease virus (strain O1)
PMID: 7822459Publication date:09/94 Type: nested RT-PCR2
Temp: (95C 1min>45C 2min>72C 2min)*30>72C 9min
Primer Name: P3 Type of Usage: Tm: 74.1 C at salt 1000.0mM
Primer Name: NK40 Type of Usage: Tm: 54 C
Primer Name: NK4 Type of Usage: Tm: 54 C

Common Data ID: JX0066 Virus: Foot-and-mouth disease virus (strain A24 Cruzeir)
PMID: 10644091Publication date:01/00 Type: RT-PCR
Temp: (95C 10sec>60C 10sec)*5>(95C 0sec>60C 0sec>72C 5sec)*25
Primer Name: PD00385 Type of Usage: Tm: 74.1 C at salt 1000.0mM
Primer Name: PD00386 Type of Usage: Tm: 74.1 C at salt 1000.0mM

Common Data ID: JX0067 Virus: Foot-and-mouth disease virus O
PMID: 10644091Publication date:01/00 Type: RT-PCR
Temp: (95C 40sec>55C 30sec>72C 30sec)*31>72C 3min
Primer Name: PD00387 Type of Usage: Tm: 77 C at salt 1000.0mM
Primer Name: PD00388 Type of Usage: Tm: 77 C at salt 1000.0mM

Common Data ID: JX0069 Virus: Foot-and-mouth disease virus O, FMDV O; Foot-and-mouth disease virus A, FMDV A; Foot-and-mouth disease virus C, FMDV C
PMID: 9607092Publication date:12/97 Type: RT-PCR
Temp: 95C 4min>(95C 1min>55C 1min>72C 1.5min)*40>72C 5min
Primer Name: V6 Type of Usage: Tm: 76.1 C at salt 1000.0mM
Primer Name: V7 Type of Usage: Tm: 75.8 C at salt 1000.0mM
Primer Name: V10 Type of Usage: Tm: 76.6 C at salt 1000.0mM
Primer Name: V14 Type of Usage: Tm: 74.4 C at salt 1000.0mM
Primer Name: V13 Type of Usage: Tm: 74.4 C at salt 1000.0mM
Primer Name: V2 Type of Usage: Tm: 67.9 C at salt 1000.0mM
Primer Name: V12 Type of Usage: Tm: 72 C at salt 1000.0mM
Primer Name: V4 Type of Usage: Tm: 74.1 C at salt 1000.0mM

Common Data ID: JX0075 Virus: Foot-and-mouth disease virus A, FMDV type A; Foot-and-mouth disease virus O, FMDV type O; Foot-and-mouth disease virus Asia 1, FMDV type Asia 1
PMID: 9608664Publication date:1998 Type: Universal PCR
Temp: (92C 30sec>60C 30sec>75C 90sec)*30>75C 5min
Primer Name: PD00471 Type of Usage: Tm: 78.7 C at salt 1000.0mM
Primer Name: PD00472 Type of Usage: Tm: 74.4 C at salt 1000.0mM
Primer Name: pj00412 Type of Usage: Tm: 74.1 C at salt 1000.0mM

Common Data ID: MP0305 Virus: Foot-and-mouth disease virus (strain O1), FMDV
PMID: 11390103Publication date:08/01 Type: RT-PCR
Temp: 42C 40min>(95C 15sec>60C 60sec)*35
Primer Name: P38 Type of Usage: Tm: 56 C
Primer Name: P33 Type of Usage: Tm: 74.1 C at salt 1000.0mM

Common Data ID: MP0306 Virus: Foot-and-mouth disease virus (strain O1Campos), FMDV
PMID: 8530568Publication date:08/95 Type: RT-PCR
Temp: (94C 45sec>54C 45sec>72C 90sec)*30>72C 7min
Primer Name: PL000900 Type of Usage: Tm: 76.1 C at salt 1000.0mM
Primer Name: PL000901 Type of Usage: Tm: 76.1 C at salt 1000.0mM

Common Data ID: MP0307 Virus: Foot-and-mouth disease virus O, FMDV O; Foot-and-mouth disease virus A, FMDV A; Foot-and-mouth disease virus C, FMDV C; Foot-and-mouth disease virus Asia 1, FMDV Asia 1
PMID: 10598089Publication date:12/99 Type: RT-PCR
Temp: 94C 5min>(94C 1min>58C 1min>72C 2min)*20>72C 7min
Primer Name: P87 Type of Usage: Tm: 78.7 C at salt 1000.0mM
Primer Name: P88 Type of Usage: Tm: 77 C at salt 1000.0mM
Primer Name: P89 Type of Usage: Tm: 78.7 C at salt 1000.0mM
Primer Name: P90 Type of Usage: Tm: 77 C at salt 1000.0mM
Primer Name: P91 Type of Usage: Tm: 77 C at salt 1000.0mM
Primer Name: P92 Type of Usage: Tm: 75.3 C at salt 1000.0mM
Primer Name: p38 Type of Usage: Tm: 56 C
Primer Name: P33 Type of Usage: Tm: 74.1 C at salt 1000.0mM

Common Data ID: MP0308 Virus: Foot-and-mouth disease virus SAT 1; Foot-and-mouth disease virus SAT 2; Foot-and-mouth disease virus SAT 3
PMID: 10598089Publication date:12/99 Type: RT-PCR
Temp: 95C 1min>(95C 15sec>60C 60sec)*35>60C 6min
Primer Name: P1 Type of Usage: PCRTm: 80.3 C at salt 1000.0mM
Primer Name: P153 Type of Usage: Tm: 76.8 C at salt 1000.0mM
Primer Name: P169 Type of Usage: Tm: 74.1 C at salt 1000.0mM
Primer Name: P126 Type of Usage: Tm: 76.8 C at salt 1000.0mM
Primer Name: P151 Type of Usage: Tm: Max Tm 80.4 C Min Tm 73.2 C at salt 1000.0mM
Primer Name: P152 Type of Usage: Tm: Max Tm 75 C Min Tm 73.2 C at salt 1000.0mM
Primer Name: P168 Type of Usage: Tm: 73.6 C at salt 1000.0mM
Primer Name: P170 Type of Usage: Tm: Max Tm 76.1 C Min Tm 65.8 C at salt 1000.0mM

Common Data ID: MP0309 Virus: Foot-and-mouth disease virus SAT 1; Foot-and-mouth disease virus SAT 2; Foot-and-mouth disease virus SAT 3
PMID: 10598089Publication date:12/99 Type: RT-PCR
Temp: 95C 1min>(95C 15sec>60C 60sec)*35>60C 6min
Primer Name: P1 Type of Usage: Tm: 80.3 C at salt 1000.0mM
Primer Name: P130 Type of Usage: Tm: 67.2 C at salt 1000.0mM
Primer Name: P159 Type of Usage: Tm: 71.5 C at salt 1000.0mM
Primer Name: P160 Type of Usage: Tm: 73.7 C at salt 1000.0mM
Primer Name: P158 Type of Usage: Tm: Max Tm 71.5 C Min Tm 67.2 C at salt 1000.0mM
Primer Name: P161 Type of Usage: Tm: Max Tm 74.1 C Min Tm 67.9 C at salt 1000.0mM

Common Data ID: MP0310 Virus: Foot-and-mouth disease virus SAT 1; Foot-and-mouth disease virus SAT 2; Foot-and-mouth disease virus SAT 3
PMID: 10598089Publication date:12/99 Type: RT-PCR
Temp: 94C 5min>(94C 1min>55C 1min>72C 2min)*30>72C 7min
Primer Name: P1 Type of Usage: Tm: 80.3 C at salt 1000.0mM
Primer Name: P153 Type of Usage: Tm: 76.8 C at salt 1000.0mM
Primer Name: P169 Type of Usage: Tm: 74.1 C at salt 1000.0mM
Primer Name: P169 Type of Usage: Tm: 74.1 C at salt 1000.0mM
Primer Name: P126 Type of Usage: Tm: 76.8 C at salt 1000.0mM
Primer Name: P151 Type of Usage: Tm: Max Tm 80.4 C Min Tm 73.2 C at salt 1000.0mM
Primer Name: P152 Type of Usage: Tm: Max Tm 75 C Min Tm 73.2 C at salt 1000.0mM
Primer Name: P168 Type of Usage: Tm: 73.6 C at salt 1000.0mM

Common Data ID: MP0311 Virus: Foot-and-mouth disease virus SAT 1; Foot-and-mouth disease virus SAT 2; Foot-and-mouth disease virus SAT 3
PMID: 10598089Publication date:12/99 Type: RT-PCR
Temp: 94C 5min>(94C 1min>55C 1min>72C 2min)*30>72C 7min
Primer Name: P1 Type of Usage: Tm: 80.3 C at salt 1000.0mM
Primer Name: P130 Type of Usage: Tm: 67.2 C at salt 1000.0mM
Primer Name: P159 Type of Usage: Tm: 71.5 C at salt 1000.0mM
Primer Name: P160 Type of Usage: Tm: 73.7 C at salt 1000.0mM
Primer Name: P158 Type of Usage: Tm: Max Tm 71.5 C Min Tm 67.2 C at salt 1000.0mM
Primer Name: P161 Type of Usage: Tm: Max Tm 74.1 C Min Tm 67.9 C at salt 1000.0mM

Common Data ID: MP0312 Virus: Foot-and-mouth disease virus SAT 1; Foot-and-mouth disease virus SAT 2; Foot-and-mouth disease virus SAT 3
PMID: 10598089Publication date:12/99 Type: RT-PCR
Temp: 94C 5min>(94C 1min>55C 1min>72C 2min)*30>72C 7min
Primer Name: P1 Type of Usage: Tm: 80.3 C at salt 1000.0mM
Primer Name: P153 Type of Usage: Tm: 76.8 C at salt 1000.0mM
Primer Name: P169 Type of Usage: Tm: 74.1 C at salt 1000.0mM
Primer Name: P169 Type of Usage: Tm: 74.1 C at salt 1000.0mM
Primer Name: P126 Type of Usage: Tm: 76.8 C at salt 1000.0mM
Primer Name: P151 Type of Usage: Tm: Max Tm 80.4 C Min Tm 73.2 C at salt 1000.0mM
Primer Name: P152 Type of Usage: Tm: Max Tm 75 C Min Tm 73.2 C at salt 1000.0mM
Primer Name: P168 Type of Usage: Tm: 73.6 C at salt 1000.0mM

Common Data ID: MP0313 Virus: Foot-and-mouth disease virus SAT 1; Foot-and-mouth disease virus SAT 2; Foot-and-mouth disease virus SAT 3
PMID: 10598089Publication date:12/99 Type: RT-PCR
Temp: 94C 5min>(94C 1min>55C 1min>72C 2min)*30>72C 7min
Primer Name: P1 Type of Usage: Tm: 80.3 C at salt 1000.0mM
Primer Name: P130 Type of Usage: Tm: 67.2 C at salt 1000.0mM
Primer Name: P159 Type of Usage: Tm: 71.5 C at salt 1000.0mM
Primer Name: P160 Type of Usage: Tm: 73.7 C at salt 1000.0mM
Primer Name: P158 Type of Usage: Tm: Max Tm 71.5 C Min Tm 67.2 C at salt 1000.0mM
Primer Name: P161 Type of Usage: Tm: Max Tm 74.1 C Min Tm 67.9 C at salt 1000.0mM

Common Data ID: MP0314 Virus: Foot-and-mouth disease virus SAT 1; Foot-and-mouth disease virus SAT 2; Foot-and-mouth disease virus SAT 3
PMID: 10598089Publication date:12/99 Type: RT-PCR
Temp: 95C 5min>(95C 15sec>60C 60sec)*25>60C 6min
Primer Name: P1 Type of Usage: Tm: 80.3 C at salt 1000.0mM
Primer Name: P153 Type of Usage: Tm: 76.8 C at salt 1000.0mM
Primer Name: P169 Type of Usage: Tm: 74.1 C at salt 1000.0mM
Primer Name: P169 Type of Usage: Tm: 74.1 C at salt 1000.0mM
Primer Name: P126 Type of Usage: Tm: 76.8 C at salt 1000.0mM
Primer Name: P151 Type of Usage: Tm: Max Tm 80.4 C Min Tm 73.2 C at salt 1000.0mM
Primer Name: P152 Type of Usage: Tm: Max Tm 75 C Min Tm 73.2 C at salt 1000.0mM
Primer Name: P168 Type of Usage: Tm: 73.6 C at salt 1000.0mM

Common Data ID: MP0315 Virus: Foot-and-mouth disease virus SAT 1; Foot-and-mouth disease virus SAT 2; Foot-and-mouth disease virus SAT 3
PMID: 10598089Publication date:12/99 Type: RT-PCR
Temp: 95C 5min>(95C 15sec>60C 60sec)*25>60C 6min
Primer Name: P1 Type of Usage: Tm: 80.3 C at salt 1000.0mM
Primer Name: P130 Type of Usage: Tm: 67.2 C at salt 1000.0mM
Primer Name: P159 Type of Usage: Tm: 71.5 C at salt 1000.0mM
Primer Name: P160 Type of Usage: Tm: 73.7 C at salt 1000.0mM
Primer Name: P158 Type of Usage: Tm: Max Tm 71.5 C Min Tm 67.2 C at salt 1000.0mM
Primer Name: P161 Type of Usage: Tm: Max Tm 74.1 C Min Tm 67.9 C at salt 1000.0mM

Common Data ID: MP0316 Virus: Foot-and-mouth disease virus O, FMDV O; Foot-and-mouth disease virus A, FMDV A; Foot-and-mouth disease virus C, FMDV C; Foot-and-mouth disease virus Asia 1, FMDV Asia 1
PMID: 10598089Publication date:12/99 Type: RT-PCR
Temp: 94C 5min>(94C 1min>58C 1min>72C 2min)*20>72C 7min
Primer Name: P40 Type of Usage: Tm: 70.5 C at salt 1000.0mM
Primer Name: P74 Type of Usage: Tm: 80.2 C at salt 1000.0mM
Primer Name: P75 Type of Usage: Tm: 82.3 C at salt 1000.0mM
Primer Name: P76 Type of Usage: Tm: 78.2 C at salt 1000.0mM
Primer Name: P77 Type of Usage: Tm: 78.2 C at salt 1000.0mM
Primer Name: P33 Type of Usage: Tm: 74.1 C at salt 1000.0mM

Common Data ID: MP0391 Virus: Foot-and-mouth disease virus, FMDV
PMID: 9274816Publication date:08/97 Type: RT-PCR
Temp: 95C 10sec>(95C 0sec>60C 0sec)*30>60C 10sec
Primer Name: P33 Type of Usage: Tm: 74.1 C at salt 1000.0mM
Primer Name: P32 Type of Usage: Tm: 74.1 C at salt 1000.0mM

Common Data ID: MP0392 Virus: Foot-and-mouth disease virus SAT 1
PMID: 9274816Publication date:08/97 Type: RT-Multiplex PCR
Temp: 95C 1min>(95C 15sec>60C 60sec)*35>60C 6min
Primer Name: P33 Type of Usage: PCRTm: 74.1 C at salt 1000.0mM
Primer Name: P1 Type of Usage: Tm: 80.3 C at salt 1000.0mM
Primer Name: P153 Type of Usage: Tm: 76.8 C at salt 1000.0mM
Primer Name: P126 Type of Usage: Tm: 76.8 C at salt 1000.0mM
Primer Name: P151 Type of Usage: Tm: Max Tm 80.4 C Min Tm 73.2 C at salt 1000.0mM
Primer Name: P152 Type of Usage: Tm: Max Tm 75 C Min Tm 73.2 C at salt 1000.0mM
Primer Name: P33 Type of Usage: Tm: 74.1 C at salt 1000.0mM

Common Data ID: MP0393 Virus: Foot-and-mouth disease virus SAT 2
PMID: 9274816Publication date:08/97 Type: RT-Multiplex PCR
Temp: 95C 1min>(95C 15sec>60C 60sec)*35>60C 6min
Primer Name: P1 Type of Usage: Tm: 80.3 C at salt 1000.0mM
Primer Name: P169 Type of Usage: Tm: 74.1 C at salt 1000.0mM
Primer Name: P168 Type of Usage: Tm: 73.6 C at salt 1000.0mM
Primer Name: P170 Type of Usage: Tm: Max Tm 76.1 C Min Tm 65.8 C at salt 1000.0mM
Primer Name: P33 Type of Usage: Tm: 74.1 C at salt 1000.0mM

Common Data ID: MP0394 Virus: Foot-and-mouth disease virus SAT 3
PMID: 9274816Publication date:08/97 Type: RT-Multiplex PCR
Temp: 95C 1min>(95C 15sec>60C 60sec)*35>60C 6min
Primer Name: P1 Type of Usage: Tm: 80.3 C at salt 1000.0mM
Primer Name: P130 Type of Usage: Tm: 67.2 C at salt 1000.0mM
Primer Name: P159 Type of Usage: Tm: 71.5 C at salt 1000.0mM
Primer Name: P160 Type of Usage: Tm: 73.7 C at salt 1000.0mM
Primer Name: P158 Type of Usage: Tm: Max Tm 71.5 C Min Tm 67.2 C at salt 1000.0mM
Primer Name: P161 Type of Usage: Tm: Max Tm 74.1 C Min Tm 67.9 C at salt 1000.0mM
Primer Name: P33 Type of Usage: Tm: 74.1 C at salt 1000.0mM

Common Data ID: MP0424 Virus: foot-and-mouth disease virus C1, FMDV
PMID: 3034729Publication date:1986 Type: cDNA synthesis
Temp: 42C 1hr
Primer Name: PD00520 Type of Usage: Tm: 78.2 C at salt 1000.0mM

Common Data ID: MP0734 Virus: Foot-and-mouth disease virus Asia 1, FMDV
PMID: 12088821Publication date:07/02 Type: RT-PCR
Temp: (93C 30sec>55C 120sec>72C 300sec)*40>72C 10min
Primer Name: Lomb1286 Type of Usage: Tm: 74.4 C at salt 1000.0mM
Primer Name: P4 Type of Usage: Tm: 80.3 C at salt 1000.0mM

Common Data ID: MP0735 Virus: Foot-and-mouth disease virus Asia 1, FMDV
PMID: 12088821Publication date:07/02 Type: RT-PCR
Temp: (93C 30sec>55C 120sec>72C 300sec)*40>72C 10min
Primer Name: VP4 Type of Usage: Tm: Max Tm 76.8 C Min Tm 75 C at salt 1000.0mM
Primer Name: P4 Type of Usage: Tm: 80.3 C at salt 1000.0mM

Common Data ID: MP0843 Virus: Foot-and-mouth disease virus, FMDV
PMID: 12237113Publication date:09/02 Type: RT-PCR
Temp: 94C 2min>(94C 60sec>55C 40sec>72C 60sec)*40>72C 10min
Primer Name: SP-FOR Type of Usage: PCRTm: 74.1 C at salt 1000.0mM
Primer Name: SP-REV Type of Usage: PCRTm: 71.5 C at salt 1000.0mM

Common Data ID: MP0943 Virus: Foot-and-mouth disease virus, FMDV
PMID: 12176143Publication date:08/02 Type: RT-PCR
Temp: 50C 2min>95C 10min>(95C 15sec>60C 60sec)*50
Primer Name: SAmulti2-P-IR-292-269R Type of Usage: Tm: 83.8 C at salt 1000.0mM
Primer Name: SA-IR-219-246F Type of Usage: Tm: Max Tm 82 C Min Tm 74.7 C at salt 1000.0mM
Primer Name: SA-IR-315-293R Type of Usage: Tm: Max Tm 78.6 C Min Tm 71.5 C at salt 1000.0mM

Common Data ID: SA0009 Virus: Foot-and-mouth disease virus A
PMID: 12502839Publication date:10/02 Type: Multiplex RT-PCR
Temp:
Primer Name: P1Low Type of Usage: Forward PrimerTm: 80.4C at salt 1000.0 mM
Primer Name: SacLow Type of Usage: Reverse PrimerTm: 70C at salt 1000.0 mM
Primer Name: P1Up Type of Usage: Forward PrimerTm: 87.5C at salt 1000.0 mM
Primer Name: SacUp Type of Usage: Reverse PrimerTm: 78.2C at salt 1000.0 mM
Primer Name: 4+fin Type of Usage: Forward PrimerTm: 76.1C at salt 1000.0 mM
Primer Name: 2+Up Type of Usage: Forward PrimerTm: 76.1C at salt 1000.0 mM
Primer Name: 2halfup Type of Usage: Forward PrimerTm: 74.1C at salt 1000.0 mM
Primer Name: VP4Low Type of Usage: Forward PrimerTm: 80.2C at salt 1000.0 mM
Primer Name: VP2Low Type of Usage: Reverse PrimerTm: 76.1C at salt 1000.0 mM

Common Data ID: SC0002 Virus: Foot-and-mouth disease virus SAT 2
PMID: 15131187Publication date:05/04 Type: RT-PCR
Temp: 42C 30min>90C 5min>94C 3min>(94C 1min<55C 1 min<72C 1.5min)*40>72C 5min
Primer Name: 2B208 Type of Usage: Reverse PrimerTm: 78.2C at salt 1000.0 mM
Primer Name: 1D209 Type of Usage: Forward PrimerTm: 75.5C at salt 1000.0 mM
Primer Name: NK61 Type of Usage: Reverse PrimerTm: 74.1C at salt 1000.0 mM
Primer Name: A-1C562 Type of Usage: Forward PrimerTm: 67.9C at salt 1000.0 mM
Primer Name: NK61 Type of Usage: Reverse PrimerTm: 74.1C at salt 1000.0 mM
Primer Name: ARS4 Type of Usage: Forward PrimerTm: 74.4C at salt 1000.0 mM

Common Data ID: SG0018 Virus: Foot-and-mouth disease virus
PMID: 14551821Publication date:06/03 Type: Q-RT-PCR
Temp: 95C 120sec>(95C 15sec>60C 15sec>75C 15sec)*55
Primer Name: SG001801 Type of Usage: Forward PrimerTm: 71.5C at salt 1000.0 mM
Primer Name: SG001802 Type of Usage: Reverse PrimerTm: 60C
Primer Name: SG001803 Type of Usage: PCR ProbeTm: 84.8C at salt 1000.0 mM
Primer Name: SG001804 Type of Usage: Forward PrimerTm: 78.9C at salt 1000.0 mM
Primer Name: SG001805 Type of Usage: Reverse PrimerTm: 75.8C at salt 1000.0 mM
Primer Name: SG001806 Type of Usage: Forward PrimerTm: 68.5C at salt 1000.0 mM
Primer Name: SG001807 Type of Usage: Reverse PrimerTm: 73.7C at salt 1000.0 mM

Common Data ID: SG0043 Virus: Foot-and-mouth disease virus HKN/2002
PMID: 12927804Publication date:2003 Type: RT-PCR
Temp:
Primer Name: F3D Type of Usage: Forward PrimerTm: 75C at salt 1000.0 mM
Primer Name: R1 Type of Usage: Reverse PrimerTm: 92.5C at salt 1000.0 mM

Common Data ID: SG0054 Virus: Foot-and-mouth disease virus
PMID: 15168202Publication date:2004 Type: RT-PCR
Temp: 48C 900sec>94C 90sec>(94C 30sec>48C 30sec>72C 40sec)*35>72C 300sec
Primer Name: 2f Type of Usage: Reverse PrimerTm: 50C
Primer Name: 4f Type of Usage: Forward PrimerTm: 50C
Primer Name: 4s Type of Usage: Forward PrimerTm: 72.9C at salt 1000.0 mM
Primer Name: 2sg Type of Usage: Reverse PrimerTm: 50C
Primer Name: 4f Type of Usage: Forward PrimerTm: 50C
Primer Name: 1ur Type of Usage: Reverse PrimerTm: 78.7C at salt 1000.0 mM
Primer Name: 5f Type of Usage: Forward PrimerTm: 70C at salt 1000.0 mM

Common Data ID: SG0055 Virus: Foot-and-mouth disease virus
PMID: 15168202Publication date:2004 Type: PCR
Temp: 48C 900sec>94C 90sec>(94C 30sec>48C 30sec>72C 40sec)*35>72C 300sec
Primer Name: 1ur Type of Usage: Reverse PrimerTm: 78.7C at salt 1000.0 mM
Primer Name: EU2 Type of Usage: Forward PrimerTm: 54C
Primer Name: pf1 Type of Usage: PCR ProbeTm: 75C at salt 1000.0 mM
Primer Name: pf2 Type of Usage: PCR ProbeTm: 83.6C at salt 1000.0 mM

Common Data ID: YS0012 Virus: Foot-and-mouth disease virus O
PMID: 14624234Publication date:11/17/2003 Type: Hybridization
Temp:
Primer Name: 20001222 Type of Usage: Tm: 98.11C at salt 1000.0 mM
Primer Name: 20001223 Type of Usage: Tm: 91.67C at salt 1000.0 mM
Primer Name: 20001224 Type of Usage: Tm: 91.67C at salt 1000.0 mM
Primer Name: 20001225 Type of Usage: Tm: 94.01C at salt 1000.0 mM
Primer Name: 20001226 Type of Usage: Tm: 97.53C at salt 1000.0 mM
Primer Name: 10002537 Type of Usage: Tm: 94.6C at salt 1000.0 mM
Primer Name: 10002538 Type of Usage: Tm: 94.6C at salt 1000.0 mM
Primer Name: 10002539 Type of Usage: Tm: 94.6C at salt 1000.0 mM
Primer Name: 10002540 Type of Usage: Tm: 94.6C at salt 1000.0 mM
Primer Name: 10002541 Type of Usage: Tm: 96.36C at salt 1000.0 mM
Primer Name: 10002542 Type of Usage: Tm: 96.36C at salt 1000.0 mM
Primer Name: 10002543 Type of Usage: Tm: 89.91C at salt 1000.0 mM
Primer Name: 10002544 Type of Usage: Tm: 89.91C at salt 1000.0 mM
Primer Name: 10002545 Type of Usage: Tm: 96.94C at salt 1000.0 mM
Primer Name: 10002546 Type of Usage: Tm: 96.94C at salt 1000.0 mM
Primer Name: 10002547 Type of Usage: Tm: 93.43C at salt 1000.0 mM
Primer Name: 10002548 Type of Usage: Tm: 93.43C at salt 1000.0 mM
Primer Name: 10002549 Type of Usage: Tm: 98.11C at salt 1000.0 mM
Primer Name: 10002550 Type of Usage: Tm: 98.11C at salt 1000.0 mM
Primer Name: 10002551 Type of Usage: Tm: 97.53C at salt 1000.0 mM
Primer Name: 10002552 Type of Usage: Tm: 97.53C at salt 1000.0 mM
Primer Name: 10002553 Type of Usage: Tm: 96.94C at salt 1000.0 mM
Primer Name: 10002554 Type of Usage: Tm: 96.94C at salt 1000.0 mM
Primer Name: 10002555 Type of Usage: Tm: 96.94C at salt 1000.0 mM
Primer Name: 10002556 Type of Usage: Tm: 96.94C at salt 1000.0 mM
Primer Name: 10004265 Type of Usage: Tm: 95.19C at salt 1000.0 mM
Primer Name: 10004266 Type of Usage: Tm: 95.19C at salt 1000.0 mM
Primer Name: 10004267 Type of Usage: Tm: 94.01C at salt 1000.0 mM
Primer Name: 10004268 Type of Usage: Tm: 94.01C at salt 1000.0 mM
Primer Name: 10004269 Type of Usage: Tm: 94.6C at salt 1000.0 mM
Primer Name: 10004270 Type of Usage: Tm: 94.6C at salt 1000.0 mM
Primer Name: 10004271 Type of Usage: Tm: 94.01C at salt 1000.0 mM
Primer Name: 10004272 Type of Usage: Tm: 94.01C at salt 1000.0 mM
Primer Name: 10004273 Type of Usage: Tm: 93.43C at salt 1000.0 mM
Primer Name: 10004274 Type of Usage: Tm: 93.43C at salt 1000.0 mM
Primer Name: 20000837 Type of Usage: Tm: 98.11C at salt 1000.0 mM
Primer Name: 20000839 Type of Usage: Tm: 91.67C at salt 1000.0 mM
Primer Name: 20000840 Type of Usage: Tm: 91.67C at salt 1000.0 mM
Primer Name: 20000841 Type of Usage: Tm: 94.01C at salt 1000.0 mM
Primer Name: 20000842 Type of Usage: Tm: 97.53C at salt 1000.0 mM

Total 284 Oligos
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