A Simple Solution for Oligonucleotide Design

Click here for a list of viruses in the database

Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

°C± °C
Oligo length:
bp± bp


Common Data ID:

Taxonomy ID:

GI Number:

Oligonucleotide information
Forward(P1) primer
Oligo ID:SW00340
Oligo type: PCR Denegeracy: 1
Target: 89-113 Tm: 83.7 C at salt 1000.0mMLength: 25
(0 other experimental conditions)
Note: Specific to BVDV, [GI:9626649]

Experimental condition used for the oligonucleotide

Common Data ID: SW0034 Publication date: 02/96
PMID: 9054133 GI: 9626649 Taxonomy ID:11100
Virus Name: bovine viral diarrhea virus (isolate NADL), BVDV; Hog cholera virus (strain Alfort), CSFV Product size (PCR):
MgCl2: 2.5 mM dNTPs: 0.2 mM Type: RT-PCR
Temp (PCR cycle):94C 3min>(94C 1min>65C 1min>72C 1min)*35
Buffer: 10mM Tris-HCl (pH 8.4), 50mM KCl
Polymerase: 0.008U/microL Taq DNA poly (CENBIOT)Cycler: PTC-100 (MJ Research)
Note: Specific to BVDV, [GI:9626649]

Total 1 Oligos
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