A Simple Solution for Oligonucleotide Design

Click here for a list of viruses in the database

Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

°C± °C
Oligo length:
bp± bp


Common Data ID:

Taxonomy ID:

GI Number:

Oligonucleotide information
Forward(Probe F) primer
Oligo ID:SH00094
Oligo type: Hybridization Denegeracy: 1
Target: 5881-5910 Tm: 79.3 C at salt 1000.0mMLength: 30
(0 other experimental conditions)
Note: BLAST position differs than that in article (325-354).

Experimental condition used for the oligonucleotide

Common Data ID: SH0009 Publication date: 09/94
PMID: 7814551 GI: 9631267 Taxonomy ID:11246
Virus Name: Bovine respiratory syncytial virus, BRSV Product size (PCR):
MgCl2: 2.5 mM dNTPs: 0.2 mM Type: RT-Nested PCR
Temp (PCR cycle):(94C 45sec>50C 45sec>72C 90sec)*25>72C 6min
Buffer: 10mM Tris-HCl (pH 9.0), 50 mM KCl, 100ng/microL BSA
Polymerase: 0.02U/microL Taq DNA poly (Perkin-Elmer Cetus)Cycler: DNA Thermal Cycler (Perkin-Elmer Cetus)
Note: BLAST position differs than that in article (325-354).

Total 1 Oligos
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