A Simple Solution for Oligonucleotide Design


Click here for a list of viruses in the database


Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

Tm:
°C± °C
Oligo length:
bp± bp



PMID:

Common Data ID:

Taxonomy ID:

GI Number:



Oligonucleotide information
Reverse(POL2) primer
Oligo ID:SG000602
Oligo type: Reverse Primer Denegeracy: 2
Target: 21646-21630 Tm: 64.6C at salt 1000.0 mMLength: 21
Sequence: ATT(A/G)TCCACAAACTGTTTTGT
(2 other experimental conditions)
Note: This is a non-specific herpesvirus primer.

Experimental condition used for the oligonucleotide

Common Data ID: SG0006 Publication date: 2002
PMID: 12208112 GI: 2337967 Taxonomy ID:35252
Virus Name: Alcelaphine herpesvirus 1 Product size (PCR): 386 bp
MgCl2: 1.5 mM dNTPs: 0.2 mM Type: PCR
Temp (PCR cycle):95C 5min>(94C 1min>45C 1min>72C 1min)*24>94C 1min>45C 1min>72C 5min
Buffer:
Polymerase: 2U Taq DNA polyCycler:
Note: This is a non-specific herpesvirus primer.



Oligonucleotide information
Reverse(POL2) primer
Oligo ID:SG000602
Oligo type: Reverse Primer Denegeracy: 2
Target: 21646-21630 Tm: 64.6C at salt 1000.0 mMLength: 21
Sequence: ATT(A/G)TCCACAAACTGTTTTGT
(2 other experimental conditions)
Note: This is a non-specific herpesvirus primer.

Experimental condition used for the oligonucleotide

Common Data ID: SG0006 Publication date: 2002
PMID: 12208112 GI: 2337967 Taxonomy ID:35252
Virus Name: Alcelaphine herpesvirus 1 Product size (PCR): 172 bp
MgCl2: 1.5 mM dNTPs: 0.2 mM Type: PCR
Temp (PCR cycle):95C 5min>(94C 1min>45C 1min>72C 1min)*24>94C 1min>45C 1min>72C 5min
Buffer:
Polymerase: 2U Taq DNA polyCycler:
Note: This is a non-specific herpesvirus primer.



Oligonucleotide information
Reverse(POL2) primer
Oligo ID:SG000602
Oligo type: Reverse Primer Denegeracy: 2
Target: 21646-21630 Tm: 64.6C at salt 1000.0 mMLength: 21
Sequence: ATT(A/G)TCCACAAACTGTTTTGT
(2 other experimental conditions)
Note: This is a non-specific herpesvirus primer.

Experimental condition used for the oligonucleotide

Common Data ID: SG0006 Publication date: 2002
PMID: 12208112 GI: 2337967 Taxonomy ID:35252
Virus Name: Alcelaphine herpesvirus 1 Product size (PCR): 386 bp
MgCl2: 1.5 mM dNTPs: 0.2 mM Type: PCR
Temp (PCR cycle):95C 5min>(94C 1min>45C 1min>72C 1min)*24>94C 1min>45C 1min>72C 5min
Buffer:
Polymerase: 2U Taq DNA polyCycler:
Note: This is a non-specific herpesvirus primer.



Oligonucleotide information
Reverse(POL2) primer
Oligo ID:SG000602
Oligo type: Reverse Primer Denegeracy: 2
Target: 21646-21630 Tm: 64.6C at salt 1000.0 mMLength: 21
Sequence: ATT(A/G)TCCACAAACTGTTTTGT
(2 other experimental conditions)
Note: This is a non-specific herpesvirus primer.

Experimental condition used for the oligonucleotide

Common Data ID: SG0006 Publication date: 2002
PMID: 12208112 GI: 2337967 Taxonomy ID:35252
Virus Name: Alcelaphine herpesvirus 1 Product size (PCR): 172 bp
MgCl2: 1.5 mM dNTPs: 0.2 mM Type: PCR
Temp (PCR cycle):95C 5min>(94C 1min>45C 1min>72C 1min)*24>94C 1min>45C 1min>72C 5min
Buffer:
Polymerase: 2U Taq DNA polyCycler:
Note: This is a non-specific herpesvirus primer.

Total 4 Oligos
Copyright © 2001-2005 VirOligo Database Project. All rights reserved Feedback is welcome. Contact webmaster Ulrich Melcher at ulrich.melcher@okstate.edu.