A Simple Solution for Oligonucleotide Design


Click here for a list of viruses in the database


Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

Tm:
°C± °C
Oligo length:
bp± bp



PMID:

Common Data ID:

Taxonomy ID:

GI Number:



Oligonucleotide information
Forward(CR32) primer
Oligo ID:RH00020
Oligo type: PCR Denegeracy: 2
Target: 56085-56104 Tm: Max Tm 80.2 C Min Tm 78.2 C at salt 1000.0mMLength: 20
Sequence: TGGTGGCCTT(C/T)GACCGCGAC
(0 other experimental conditions)
Note:

Experimental condition used for the oligonucleotide

Common Data ID: RH0002 Publication date: 01/99
PMID: 10203465 GI: 2653291 Taxonomy ID:31518
Virus Name: Bovine herpesvirus type 1.1 (strain Jura); Bovine herpesvirus type 1.1 (strain Cooper); Bovine herpesvirus type 1.2 (strain K22); Caprine herpesvirus 1; Rangiferine herpesvirus 1; cervid herpesvirus 1; Bovine herpesvirus 5 (strain N569) Product size (PCR):
bp
MgCl2: 1.5 mM dNTPs: 0.2 mM Type: Nested PCR 2
Temp (PCR cycle):94C 9min>(95C 1min>62C 1min>72C min)*35>72C 7min
Buffer: 50mM KCl, 10mM Tris-HCl, 10% DMSO
Polymerase: 0.02U/microL Amplitaq Gold Poly (Perkin-Elmer Cetus)Cycler:
Note:

Total 1 Oligos
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