A Simple Solution for Oligonucleotide Design

Click here for a list of viruses in the database

Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

°C± °C
Oligo length:
bp± bp


Common Data ID:

Taxonomy ID:

GI Number:

Oligonucleotide information
Reverse(PN00425) primer
Oligo ID:pn00425
Oligo type: Denegeracy: 1
Target: 320-301 Tm: 72 C at salt 1000.0mMLength: 20
(4 other experimental conditions)
Note: Used with PN00426, [GI:902376], in secondary PCR.

Experimental condition used for the oligonucleotide

Common Data ID: BH0057 Publication date: 12/98
PMID: 9850544 GI: 902376 Taxonomy ID:54315
Virus Name: Bovine viral diarrhea virus-2, BVDV2; Bovine viral diarrhea virus (isolate NADL), BVDV-NADL Product size (PCR):
MgCl2: 1.5 mM dNTPs: 0.2 mM Type: RT-Nested PCR
Temp (PCR cycle):94C 2min>(94C 30sec>50C 45sec>72C 60sec)*30>72C 7min
Buffer: 20mM Tris-HCl (pH 8.4), 50mM KCl
Polymerase: 0.05U/microL Taq polyCycler:
Note: Used with PN00426, [GI:902376], in secondary PCR.

Total 1 Oligos
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