A Simple Solution for Oligonucleotide Design

Click here for a list of viruses in the database

Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

°C± °C
Oligo length:
bp± bp


Common Data ID:

Taxonomy ID:

GI Number:

Oligonucleotide information
Reverse(R1) primer
Oligo ID:PN00421
Oligo type: Denegeracy: 1
Target: 392-373 Tm: 72 C at salt 1000.0mMLength: 20
(5 other experimental conditions)

Experimental condition used for the oligonucleotide

Common Data ID: SK0116 Publication date: 1995
PMID: 8789057 GI: 9626649 Taxonomy ID:11099
Virus Name: pestivirus type 1 WI-38(CCL75); pestivirus type 2 CPA(CCL207) Product size (PCR): 285 bp
MgCl2: N/A mM dNTPs: 0.2 mM Type: RT-PCR
Temp (PCR cycle):(94C 30sec>56C 120sec>72C 120sec)*30
Buffer: 1x Buffer (Perkin-Elmer Cetus)
Polymerase: 0.025U/microL Taq DNA poly (Perkin-Elmer Cetus)Cycler:

Total 1 Oligos
Copyright © 2001-2005 VirOligo Database Project. All rights reserved Feedback is welcome. Contact webmaster Ulrich Melcher at ulrich.melcher@okstate.edu.