A Simple Solution for Oligonucleotide Design


Click here for a list of viruses in the database


Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

Tm:
°C± °C
Oligo length:
bp± bp



PMID:

Common Data ID:

Taxonomy ID:

GI Number:



Oligonucleotide information
Reverse(HCV368) primer
Oligo ID:PN00275
Oligo type: Denegeracy: 1
Target: 389-373 Tm: 52 CLength: 17
Sequence: CCATGTGCCATGTACAG
(4 other experimental conditions)
Note:

Experimental condition used for the oligonucleotide

Common Data ID: SK0060 Publication date: 10/00
PMID: 11131328 GI: 9626649 Taxonomy ID:144353
Virus Name: Bovine viral diarrhea virus, BVDV Product size (PCR):
bp
MgCl2: 4.0 mM dNTPs: 0.6 mM Type: RT-Nested PCR
Temp (PCR cycle):(94C 60sec>55C 60sec>72C 45sec)*30>72C 10min
Buffer: 1x Buffer (Promega)
Polymerase: 0.075U/microL Taq poly (Promega)Cycler:
Note:



Oligonucleotide information
Reverse(HCV368) primer
Oligo ID:PN00275
Oligo type: Denegeracy: 1
Target: 389-373 Tm: 52 CLength: 17
Sequence: CCATGTGCCATGTACAG
(4 other experimental conditions)
Note:

Experimental condition used for the oligonucleotide

Common Data ID: SK0060 Publication date: 10/00
PMID: 11131328 GI: 9626649 Taxonomy ID:144353
Virus Name: Bovine viral diarrhea virus, BVDV Product size (PCR):
bp
MgCl2: 4.0 mM dNTPs: 0.6 mM Type: RT-Nested PCR
Temp (PCR cycle):(94C 60sec>55C 60sec>72C 45sec)*30>72C 10min
Buffer: 1x Buffer (Promega)
Polymerase: 0.075U/microL Taq poly (Promega)Cycler:
Note:

Total 2 Oligos
Copyright © 2001-2005 VirOligo Database Project. All rights reserved Feedback is welcome. Contact webmaster Ulrich Melcher at ulrich.melcher@okstate.edu.