A Simple Solution for Oligonucleotide Design

Click here for a list of viruses in the database

Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

°C± °C
Oligo length:
bp± bp


Common Data ID:

Taxonomy ID:

GI Number:

Oligonucleotide information
Forward(MC1) primer
Oligo ID:PN00077
Oligo type: Denegeracy: 1
Target: 39502-39527 Tm: 77.3 C at salt 1000.0mMLength: 26
(0 other experimental conditions)

Experimental condition used for the oligonucleotide

Common Data ID: BH0008 Publication date: 06/95
PMID: 8600434 GI: 10140926 Taxonomy ID:35252
Virus Name: Alcelaphine herpesvirus 1, AHV-1 Product size (PCR):
MgCl2: 1.5 mM dNTPs: 1.0 mM Type: Nested PCR
Temp (PCR cycle):97C 3min>62C 0sec>72C 1min>(93C 40sec>62C 30sec>72C 60sec)*33>72C 5min
Buffer: 10mM Tris-HCl (pH 9.0), 50mM KCl, 1% Triton X-100
Polymerase: 0.03U/microL Taq DNA poly (Promega)Cycler:

Total 1 Oligos
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