A Simple Solution for Oligonucleotide Design


Click here for a list of viruses in the database


Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

Tm:
°C± °C
Oligo length:
bp± bp



PMID:

Common Data ID:

Taxonomy ID:

GI Number:



Oligonucleotide information
Forward(AB3822) primer
Oligo ID:pn00064
Oligo type: Denegeracy: 1
Target: N/A-N/A Tm: 67.3 C at salt 1000.0mMLength: 25
Sequence: GGGTCGACTTTTTTTTTTTTTTTTT
(0 other experimental conditions)
Note: RT primer complementary to poly(A) tail of mRNA.
Article does not mention target, and BLASTdoes not produce a target.

Experimental condition used for the oligonucleotide

Common Data ID: SK0058 Publication date: 07/99
PMID: 10423142 GI: 415598 Taxonomy ID:10510
Virus Name: Bovine adenovirus type 3, BAV3 Product size (PCR):
bp
MgCl2: 2.5 mM dNTPs: 0.2 mM Type: RT-PCR
Temp (PCR cycle):(95C 1min>45C 1.5min>72C 3min)*33
Buffer: PCR Buffer (BRL)
Polymerase: 2.5U Taq DNA poly (BRL)Cycler: DNA thermal cycler (Perkin-Elmer)
Note: RT primer complementary to poly(A) tail of mRNA.
Article does not mention target, and BLASTdoes not produce a target.

Total 1 Oligos
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