A Simple Solution for Oligonucleotide Design


Click here for a list of viruses in the database


Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

Tm:
°C± °C
Oligo length:
bp± bp



PMID:

Common Data ID:

Taxonomy ID:

GI Number:



Oligonucleotide information
Forward(SA-IR-219-246F) primer
Oligo ID:PM00594
Oligo type: Denegeracy: 32
Target: 859-886 Tm: Max Tm 82 C Min Tm 74.7 C at salt 1000.0mMLength: 28
Sequence: CAC(C/T)T(C/T)AAG(A/G)TGACA(C/T)TG(A/G)TACTGGTAC
(0 other experimental conditions)
Note:

Experimental condition used for the oligonucleotide

Common Data ID: MP0943 Publication date: 08/02
PMID: 12176143 GI: 12018088 Taxonomy ID:12110
Virus Name: Foot-and-mouth disease virus, FMDV Product size (PCR):
bp
MgCl2: N/A mM dNTPs: N/A mM Type: RT-PCR
Temp (PCR cycle):50C 2min>95C 10min>(95C 15sec>60C 60sec)*50
Buffer: N/A
Polymerase: N/ACycler: GeneAmp 5700 Sequence Detection System thermal cycler (Applied Biosystems)
Note:

Total 1 Oligos
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