A Simple Solution for Oligonucleotide Design

Click here for a list of viruses in the database

Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

°C± °C
Oligo length:
bp± bp


Common Data ID:

Taxonomy ID:

GI Number:

Oligonucleotide information
Forward(BVDu1) primer
Oligo ID:PM00503
Oligo type: Denegeracy: 6
Target: 176-197 Tm: Max Tm 78.5 C Min Tm 74.7 C at salt 1000.0mMLength: 22
(0 other experimental conditions)

Experimental condition used for the oligonucleotide

Common Data ID: MP0865 Publication date: 12/02
PMID: 12421586 GI: 7960753 Taxonomy ID:11100
Virus Name: Bovine viral diarrhea virus (isolate NADL), BVDV Product size (PCR):
MgCl2: 2.5 mM dNTPs: 0.2 mM Type: RT-Semi-nested PCR
Temp (PCR cycle):95C 3min>(95C 30sec>55C 30sec>72C 60sec)*25>72C 3min
Buffer: 1x reaction buffer (Promega), 0.02% BSA
Polymerase: 0.02U/microL Taq DNA poly (Promega)Cycler: PTC 200 thermal cycler (MJ Research)

Total 1 Oligos
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