A Simple Solution for Oligonucleotide Design

Click here for a list of viruses in the database

Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

°C± °C
Oligo length:
bp± bp


Common Data ID:

Taxonomy ID:

GI Number:

Oligonucleotide information
Forward(Ol-LSIV) primer
Oligo ID:pm00216
Oligo type: Denegeracy: 1
Target: 1849-1878 Tm: 83.4 C at salt 1000.0mMLength: 30
(0 other experimental conditions)
Note: Multiple mismatches.

Experimental condition used for the oligonucleotide

Common Data ID: BM1811 Publication date: 12/01
PMID: 11878878 GI: 2465191 Taxonomy ID:11099
Virus Name: pestivirus type 1 Product size (PCR):
MgCl2: N/A mM dNTPs: 0.2 mM Type: RT-Nested PCR 2
Temp (PCR cycle):95C 2min>(95C 40sec>56C 40sec>72C 50sec)*30>72C 5min
Buffer: Taq polymerase buffer
Polymerase: Taq poly (QBiogene)Cycler:
Note: Multiple mismatches.

Total 1 Oligos
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