A Simple Solution for Oligonucleotide Design

Click here for a list of viruses in the database

Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

°C± °C
Oligo length:
bp± bp


Common Data ID:

Taxonomy ID:

GI Number:

Oligonucleotide information
Reverse(SAIR 172R) primer
Oligo ID:PL00111
Oligo type: Denegeracy: 1
Target: 469-449 Tm: 74.4 C at salt 1000.0mMLength: 21
(0 other experimental conditions)

Experimental condition used for the oligonucleotide

Common Data ID: JX0030 Publication date: 03/01
PMID: 11164915 GI: 61076 Taxonomy ID:73482
Virus Name: Foot-and-mouth disease virus (strain O1) Product size (PCR):
MgCl2: 2.2 mM dNTPs: 0.2 mM Type: PCR
Temp (PCR cycle):50C 2min>95C 10min>(95C 15sec>60C 60sec)*50
Buffer: 1x SYBR master mix (PE Applied Biosystems, UK)
Polymerase: Taq Gold thermostable poly (PE Applied Biosystems)Cycler: PE Applied Biosystems 5700 thermal cycler (PE Applied Biosystems, UK)

Total 1 Oligos
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