A Simple Solution for Oligonucleotide Design


Click here for a list of viruses in the database


Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

Tm:
°C± °C
Oligo length:
bp± bp



PMID:

Common Data ID:

Taxonomy ID:

GI Number:



Oligonucleotide information
Forward(3C3 sense) primer
Oligo ID:pl00109
Oligo type: Denegeracy: 1
Target: 5450-5468 Tm: 73.7 C at salt 1000.0mMLength: 19
Sequence: CCACAAGCTGAAGGACCCT
(0 other experimental conditions)
Note:

Experimental condition used for the oligonucleotide

Common Data ID: BM0341 Publication date: 06/98
PMID: 9694331 GI: 61076 Taxonomy ID:73481
Virus Name: Foot-and-mouth disease virus (strain A22/550 AZERBAIJAN 65); Foot-and-mouth disease virus (strain A24 Cruzeiro); Foot-and-mouth disease virus Asia 1; foot-and-mouth disease virus C1; Foot-and-mouth disease virus SAT 2 Product size (PCR):
bp
MgCl2:
mM
dNTPs:
mM
Type: RT-PCR
Temp (PCR cycle):(93C 30sec>55C 2min>72C 5min)*30>72C 10min
Buffer:
Polymerase: 0.025U/microL Taq poly (Boehringer)Cycler: PTC 100
Note:

Total 1 Oligos
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