A Simple Solution for Oligonucleotide Design


Click here for a list of viruses in the database


Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

Tm:
°C± °C
Oligo length:
bp± bp



PMID:

Common Data ID:

Taxonomy ID:

GI Number:



Oligonucleotide information
Reverse(3D400) primer
Oligo ID:pl00098
Oligo type: Denegeracy: 1
Target: 7026-7009 Tm: 58 CLength: 18
Sequence: GACCGTGCCGTTCTCGAA
(0 other experimental conditions)
Note:

Experimental condition used for the oligonucleotide

Common Data ID: BM0296 Publication date: 1998
PMID: 9652063 GI: 10445391 Taxonomy ID:12111
Virus Name: Foot-and-mouth disease virus A; Foot-and-mouth disease virus Asia 1; Foot-and-mouth disease virus C; Foot-and-mouth disease virus O; Foot-and-mouth disease virus SAT 1; Foot-and-mouth disease virus SAT 2; Foot-and-mouth disease virus SAT 3 Product size (PCR):
bp
MgCl2:
mM
dNTPs: 0.1 mM Type: RT-nested PCR
Temp (PCR cycle):50C 15min>94C 90sec>(94C 30sec>55C 30sec>72C 42sec)*35
Buffer: 100mM Tris-HCl (pH 9.0), 50mM KCl, 0.1% Triton X-100
Polymerase: 0.033U/microL Taq DNA polyCycler: DNA Thermal Cycler
Note:

Total 1 Oligos
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