A Simple Solution for Oligonucleotide Design

Click here for a list of viruses in the database

Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

°C± °C
Oligo length:
bp± bp


Common Data ID:

Taxonomy ID:

GI Number:

Oligonucleotide information
Reverse(P33) primer
Oligo ID:PL00093
Oligo type: Denegeracy: 1
Target: 3759-3740 Tm: 74.1 C at salt 1000.0mMLength: 20
(11 other experimental conditions)

Experimental condition used for the oligonucleotide

Common Data ID: MP0305 Publication date: 08/01
PMID: 11390103 GI: 15216732 Taxonomy ID:73482
Virus Name: Foot-and-mouth disease virus (strain O1), FMDV Product size (PCR):
MgCl2: 1.5 mM dNTPs: 0.00125 mM Type: RT-PCR
Temp (PCR cycle):42C 40min>(95C 15sec>60C 60sec)*35
Buffer: 1x DyNAZyme buffer (Finnzymes OY), 0.16U/microLRNAsin (Promega), 0.032U/microL AMV RTase (Promega)
Polymerase: 0.01U/microL DyNAZyme DNA poly (Finnzymes OY)Cycler: Gene Amp CR System 9600 (Perkin Elmer)

Total 1 Oligos
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