A Simple Solution for Oligonucleotide Design


Click here for a list of viruses in the database


Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

Tm:
°C± °C
Oligo length:
bp± bp



PMID:

Common Data ID:

Taxonomy ID:

GI Number:



Oligonucleotide information
Reverse(NK40) primer
Oligo ID:pd00425
Oligo type: Denegeracy: 1
Target: 3433-3417 Tm: 54 CLength: 17
Sequence: GCCCTCTTCATCCGGTA
(0 other experimental conditions)
Note:

Experimental condition used for the oligonucleotide

Common Data ID: JX0050 Publication date: 09/94
PMID: 7822459 GI: 61076 Taxonomy ID:73482
Virus Name: Foot-and-mouth disease virus (strain O1) Product size (PCR): 198 bp
MgCl2: 1.3 mM dNTPs: 0.24 mM Type: nested RT-PCR2
Temp (PCR cycle):(95C 1min>45C 2min>72C 2min)*30>72C 9min
Buffer: 15mM Tris-HCl (pH 8.3), 58mM KCl
Polymerase: 0.05U/microL Taq poly (Perkin Elmer Cetus)Cycler: intelligent heating block (Hybaid)
Note:

Total 1 Oligos
Copyright © 2001-2005 VirOligo Database Project. All rights reserved Feedback is welcome. Contact webmaster Ulrich Melcher at ulrich.melcher@okstate.edu.