A Simple Solution for Oligonucleotide Design

Click here for a list of viruses in the database

Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

°C± °C
Oligo length:
bp± bp


Common Data ID:

Taxonomy ID:

GI Number:

Oligonucleotide information
Reverse(P1) primer
Oligo ID:pd00423
Oligo type: Denegeracy: 1
Target: 3578-3559 Tm: 78.2 C at salt 1000.0mMLength: 20
(0 other experimental conditions)

Experimental condition used for the oligonucleotide

Common Data ID: JX0049 Publication date: 09/94
PMID: 7822459 GI: 61076 Taxonomy ID:73482
Virus Name: Foot-and-mouth disease virus (strain O1) Product size (PCR): 216 bp
MgCl2: 1.3 mM dNTPs: 0.24 mM Type: nested RT-PCR1
Temp (PCR cycle):(95C 1min>45C 2min>72C 2min)*30>72C 9min
Buffer: 15mM Tris-HCl (pH 8.3), 58mM KCl, 1mM DTT, 0.008mg/ml BSA
Polymerase: 0.05U/microL Taq poly (Perkin Elmer Cetus)Cycler: intelligent heating block (Hybaid)

Total 1 Oligos
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