A Simple Solution for Oligonucleotide Design


Click here for a list of viruses in the database


Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

Tm:
°C± °C
Oligo length:
bp± bp



PMID:

Common Data ID:

Taxonomy ID:

GI Number:



Oligonucleotide information
Forward(PD00386) primer
Oligo ID:pd00386
Oligo type: Denegeracy: 1
Target: 3940-3959 Tm: 74.1 C at salt 1000.0mMLength: 20
Sequence: CAGATGCAGGAGGACATGTC
(3 other experimental conditions)
Note:

Experimental condition used for the oligonucleotide

Common Data ID: JX0066 Publication date: 01/00
PMID: 10644091 GI: 5921457 Taxonomy ID:12115
Virus Name: Foot-and-mouth disease virus (strain A24 Cruzeir) Product size (PCR): 131 bp
MgCl2: 4.6 mM dNTPs: 0.2 mM Type: RT-PCR
Temp (PCR cycle):(95C 10sec>60C 10sec)*5>(95C 0sec>60C 0sec>72C 5sec)*25
Buffer: 18mM Tris-HCl (pH 8.3), 23mM KCl
Polymerase: 0.5microL Stoffel fragment of Taq poly (Perkin-Elmer)Cycler: Perkin-Elmer 9600
Note:

Total 1 Oligos
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