A Simple Solution for Oligonucleotide Design

Click here for a list of viruses in the database

Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

°C± °C
Oligo length:
bp± bp


Common Data ID:

Taxonomy ID:

GI Number:

Oligonucleotide information
Reverse(PD00385) primer
Oligo ID:pd00385
Oligo type: Denegeracy: 1
Target: 3711-3692 Tm: 74.1 C at salt 1000.0mMLength: 20
(11 other experimental conditions)

Experimental condition used for the oligonucleotide

Common Data ID: JX0066 Publication date: 01/00
PMID: 10644091 GI: 5921457 Taxonomy ID:12115
Virus Name: Foot-and-mouth disease virus (strain A24 Cruzeir) Product size (PCR): 131 bp
MgCl2: 4.6 mM dNTPs: 0.2 mM Type: RT-PCR
Temp (PCR cycle):(95C 10sec>60C 10sec)*5>(95C 0sec>60C 0sec>72C 5sec)*25
Buffer: 18mM Tris-HCl (pH 8.3), 23mM KCl
Polymerase: 0.5microL Stoffel fragment of Taq poly (Perkin-Elmer)Cycler: Perkin-Elmer 9600

Total 1 Oligos
Copyright © 2001-2005 VirOligo Database Project. All rights reserved Feedback is welcome. Contact webmaster Ulrich Melcher at ulrich.melcher@okstate.edu.