A Simple Solution for Oligonucleotide Design

Click here for a list of viruses in the database

Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

°C± °C
Oligo length:
bp± bp


Common Data ID:

Taxonomy ID:

GI Number:

Oligonucleotide information
Forward(SV1) primer
Oligo ID:PD00193
Oligo type: Denegeracy: 1
Target: 421-439 Tm: 80.1 C at salt 1000.0mMLength: 19
(0 other experimental conditions)

Experimental condition used for the oligonucleotide

Common Data ID: JX0029 Publication date: 02/95
PMID: 7714205 GI: 61060 Taxonomy ID:12113
Virus Name: Foot-and-mouth disease virus (strain A5); foot-and-mouth disease virus C1; Foot-and-mouth disease virus (strain O1) Product size (PCR):
MgCl2: 2.5 mM dNTPs: 0.25 mM Type: RT-PCR
Temp (PCR cycle):(95C 15sec>55C 15sec>72C 45sec)*30
Buffer: 25mM Tris-HCl (pH 8.4), 75mM KCl
Polymerase: 0.025U/microL SuperTaq poly (Stehelin, Basel, Switzerland)Cycler: Bio-med Thermocycler 60 (Gesellschaft fur Biotechnologie und Medizinterchnik, Theres, Germany)

Total 1 Oligos
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