A Simple Solution for Oligonucleotide Design

Click here for a list of viruses in the database

Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

°C± °C
Oligo length:
bp± bp


Common Data ID:

Taxonomy ID:

GI Number:

Oligonucleotide information
Reverse(FMDV-3DR) primer
Oligo ID:PC00020
Oligo type: Denegeracy: 1
Target: 6691-6666 Tm: 82.1 C at salt 1000.0mMLength: 26
(0 other experimental conditions)
Note: Mismatches at postions 6689, 6677, and 6680.

Experimental condition used for the oligonucleotide

Common Data ID: JP0024 Publication date: 02/01
PMID: 11222004 GI: 12018088 Taxonomy ID:12116
Virus Name: Foot-and-mouth disease virus C Product size (PCR): N/A bp
MgCl2: N/A mM dNTPs: N/A mM Type: Hybridization
Temp (PCR cycle):42C Overnight
Buffer: In Situ Hyb Buffer(Ambion, Abingdon, UK)
Note: Mismatches at postions 6689, 6677, and 6680.

Total 1 Oligos
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