A Simple Solution for Oligonucleotide Design


Click here for a list of viruses in the database


Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

Tm:
°C± °C
Oligo length:
bp± bp



PMID:

Common Data ID:

Taxonomy ID:

GI Number:



Oligonucleotide information
Reverse(HexAdJ) primer
Oligo ID:pb00886
Oligo type: Denegeracy: 16
Target: 19158-19136 Tm: Max Tm 82.2 C Min Tm 75 C at salt 1000.0mMLength: 23
Sequence: CAGC(A/G)(C/T)(A/G)CCGCGGATGTCAAA(A/G)T
(0 other experimental conditions)
Note:

Experimental condition used for the oligonucleotide

Common Data ID: BM1300 Publication date: 04/96
PMID: 8908748 GI: 209811 Taxonomy ID:10546
Virus Name: bovine adenovirus; goat adenovirus 1; porcine adenovirus Product size (PCR): 301 bp
MgCl2: 1.5 mM dNTPs: 0.3 mM Type: Univesal PCR
Temp (PCR cycle):94C 10min>(94C 30sec>55C 30sec>72C 30sec)*35>72C 5min
Buffer: 50mM KCl, 10mM Tris-HCl (pH 9.0)
Polymerase: 0.02U/microL Taq DNA polyCycler: DNA thermal cycler (Perkin Elmer Cetus)
Note:

Total 1 Oligos
Copyright © 2001-2005 VirOligo Database Project. All rights reserved Feedback is welcome. Contact webmaster Ulrich Melcher at ulrich.melcher@okstate.edu.