A Simple Solution for Oligonucleotide Design

Click here for a list of viruses in the database

Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

°C± °C
Oligo length:
bp± bp


Common Data ID:

Taxonomy ID:

GI Number:

Oligonucleotide information
Forward(5gC+) primer
Oligo ID:MT00030
Oligo type: PCR Denegeracy: 1
Target: 180-200 Tm: 80.3 C at salt 1000.0mMLength: 21
(0 other experimental conditions)

Experimental condition used for the oligonucleotide

Common Data ID: MT0003 Publication date: 03/97
PMID: 9376428 GI: 1173639 Taxonomy ID:35244
Virus Name: Bovine herpesvirus 5, BHV-5 Product size (PCR): 166 bp
MgCl2: 1.25 mM dNTPs: 0.2 mM Type: Nested PCR 2 (2)
Temp (PCR cycle):99C 8min>(97C 60sec>75C 45sec)*4>(97C 60sec>73C 45sec)*36>72C 5min
Buffer: 1x PCR Buffer II (Perkin-Elmer), 6% glycerol
Polymerase: 0.03U/microL Taq poly (Perkin-Elmer)Cycler:

Total 1 Oligos
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