A Simple Solution for Oligonucleotide Design

Click here for a list of viruses in the database

Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

°C± °C
Oligo length:
bp± bp


Common Data ID:

Taxonomy ID:

GI Number:

Oligonucleotide information
Forward(SP-REV) primer
Oligo ID:MP08431
Oligo type: PCR Denegeracy: 1
Target: 341-359 Tm: 71.5 C at salt 1000.0mMLength: 19
(0 other experimental conditions)

Experimental condition used for the oligonucleotide

Common Data ID: MP0843 Publication date: 09/02
PMID: 12237113 GI: 5921457 Taxonomy ID:12110
Virus Name: Foot-and-mouth disease virus, FMDV Product size (PCR): N/A bp
MgCl2: 1.5 mM dNTPs: 0.2 mM Type: RT-PCR
Temp (PCR cycle):94C 2min>(94C 60sec>55C 40sec>72C 60sec)*40>72C 10min
Buffer: 1x PCR buffer (Gibco-BRL)
Polymerase: 0.04U/microL Taq DNA poly (Gibco-BRL)Cycler: Robocycler (Stratagene)

Total 1 Oligos
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