A Simple Solution for Oligonucleotide Design


Click here for a list of viruses in the database


Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

Tm:
°C± °C
Oligo length:
bp± bp



PMID:

Common Data ID:

Taxonomy ID:

GI Number:



Oligonucleotide information
Reverse(B12) primer
Oligo ID:MP01421
Oligo type: PCR Denegeracy: 4
Target: 12545-12526 Tm: Max Tm 76.1 C Min Tm 74.1 C at salt 1000.0mMLength: 20
Sequence: TAGACGTCGGG(C/T)GT(A/T)TCCTC
(0 other experimental conditions)
Note: Target area found in article

Experimental condition used for the oligonucleotide

Common Data ID: MP0142 Publication date: 1999
PMID: 10403696 GI: 7960753 Taxonomy ID:11100
Virus Name: bovine viral diarrhea virus (isolate NADL), BVDV Product size (PCR): 372 bp
MgCl2: N/A mM dNTPs: N/A mM Type: RT-PCR
Temp (PCR cycle):(94C 1min>56C 1min>72C 1min)*35
Buffer: N/A
Polymerase: N/ACycler: N/A
Note: Target area found in article

Total 1 Oligos
Copyright © 2001-2005 VirOligo Database Project. All rights reserved Feedback is welcome. Contact webmaster Ulrich Melcher at ulrich.melcher@okstate.edu.