A Simple Solution for Oligonucleotide Design

Click here for a list of viruses in the database

Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

°C± °C
Oligo length:
bp± bp


Common Data ID:

Taxonomy ID:

GI Number:

Oligonucleotide information
Reverse(MP00844) primer
Oligo ID:MP00843
Oligo type: PCR Denegeracy: 1
Target: N/A-N/A Tm: 72 C at salt 1000.0mMLength: 20
(4 other experimental conditions)
Note: Second (nested) PCR only amplifies BVDV2

Experimental condition used for the oligonucleotide

Common Data ID: MP0084 Publication date: 02/98
PMID: 9633045 GI: N/A Taxonomy ID:136447
Virus Name: bovine viral diarrhea virus type 2, BVDV-2 Product size (PCR): N/A bp
MgCl2: N/A mM dNTPs: 0.1 mM Type: Nested RT-PCR
Temp (PCR cycle):(94C 10sec>50C 15sec>72C 30sec)*30>72C 10min
Buffer: 1x PCR buffer (Boehringer Mannheim Corp., Indianapolis, IN, USA)
Polymerase: 0.025U/microL Taq poly (Boehringer Mannheim Corp., Indianapolis, IN, USA)Cycler: N/A
Note: Second (nested) PCR only amplifies BVDV2

Total 1 Oligos
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