A Simple Solution for Oligonucleotide Design

Click here for a list of viruses in the database

Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

°C± °C
Oligo length:
bp± bp


Common Data ID:

Taxonomy ID:

GI Number:

Oligonucleotide information
Forward(p5) primer
Oligo ID:MP00794
Oligo type: PCR Denegeracy: 1
Target: N/A-N/A Tm: 80.5 C at salt 1000.0mMLength: 27
(0 other experimental conditions)
Note: Used with p6

Experimental condition used for the oligonucleotide

Common Data ID: MP0079 Publication date: 04/94
PMID: 7985409 GI: N/A Taxonomy ID:11101
Virus Name: pestivirus type 3, BDV Product size (PCR): N/A bp
MgCl2: 1.5 mM dNTPs: 1 mM Type: RT-PCR
Temp (PCR cycle):94C 2min>(94C 1min>55C 1min>72C 3min)*30>72C 30min
Buffer: 1x PCR Buffer (100mM KCl, 10mM Tris-HCl pH 8.3), 0.25mM dithiothreitol
Polymerase: 2.5U/microL Amplitaq poly (Perkin-Elmer Cetus Corp., Norwalk, CT)Cycler: N/A
Note: Used with p6

Total 1 Oligos
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