A Simple Solution for Oligonucleotide Design


Click here for a list of viruses in the database


Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

Tm:
°C± °C
Oligo length:
bp± bp



PMID:

Common Data ID:

Taxonomy ID:

GI Number:



Oligonucleotide information
Forward(B6) primer
Oligo ID:MO00053
Oligo type: PCR Denegeracy: 1
Target: 360-343 Tm: 56 CLength: 18
Sequence: CTAGCGGAATAGCAGGTC
(0 other experimental conditions)
Note: This primer was for BVDV type 2. The target area was specified in the article and is only for 17 base pairs.

Experimental condition used for the oligonucleotide

Common Data ID: MO0005 Publication date: 01/99
PMID: 10028170 GI:
Taxonomy ID:144353
Virus Name: bovine viral diarrhea virus, BVDV-1, BVDV-2 Product size (PCR): 221 bp
MgCl2: 3 mM dNTPs: 0.5 mM Type: RT-PCR
Temp (PCR cycle):95C 5min>(94C 1min>52C 1min>72C 1min)*35
Buffer: 20mM Tris-HCl (pH 8.4); 50mM KCl
Polymerase: 0.05U/microL Taq poly (GIBCO BRL)Cycler:
Note: This primer was for BVDV type 2. The target area was specified in the article and is only for 17 base pairs.

Total 1 Oligos
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