A Simple Solution for Oligonucleotide Design


Click here for a list of viruses in the database


Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

Tm:
°C± °C
Oligo length:
bp± bp



PMID:

Common Data ID:

Taxonomy ID:

GI Number:



Oligonucleotide information
Forward(324-U) primer
Oligo ID:KS00150
Oligo type: PCR Denegeracy: 2
Target: 108-128 Tm: 73.9 C at salt 1000.0mMLength: 21
Sequence: ATGCCC(T/A)TAGTAGGACTAGCA
(3 other experimental conditions)
Note:

Experimental condition used for the oligonucleotide

Common Data ID: KS0015 Publication date: 01/99
PMID: 10028179 GI: 9626649 Taxonomy ID:11099
Virus Name: pestivirus type 1, BVDV Product size (PCR): 288 bp
MgCl2: 2.2 mM dNTPs: 0.2 mM Type: RT-Nested PCR 2
Temp (PCR cycle):(94C 10sec>50C 30sec>72C 30sec)*25
Buffer: 1x PCR buffer
Polymerase: 0.025U/microL AmpliTaq polyCycler:
Note:

Total 1 Oligos
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