A Simple Solution for Oligonucleotide Design

Click here for a list of viruses in the database

Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

°C± °C
Oligo length:
bp± bp


Common Data ID:

Taxonomy ID:

GI Number:

Oligonucleotide information
Forward(P1U) primer
Oligo ID:KS00140
Oligo type: PCR Denegeracy: 1
Target: 98-118 Tm: 76.4 C at salt 1000.0mMLength: 21
(3 other experimental conditions)

Experimental condition used for the oligonucleotide

Common Data ID: KS0014 Publication date: 01/99
PMID: 10028179 GI: 9626649 Taxonomy ID:11099
Virus Name: pestivirus type 1, BVDV Product size (PCR):
MgCl2: 2.2 mM dNTPs: 0.2 mM Type: RT-Nested PCR 1
Temp (PCR cycle):94C 3min>(94C 45sec>54C 60sec>72C 60sec)*35 >72C 7min
Buffer: 1x PCR buffer
Polymerase: 0.025U/microL AmpliTaq polyCycler:

Total 1 Oligos
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