A Simple Solution for Oligonucleotide Design

Click here for a list of viruses in the database


Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

Tm:
°C± °C
Oligo length:
bp± bp



PMID:

Common Data ID:

Taxonomy ID:

GI Number:

CommonData ID: SA0006Publication date: 12/03
PMID: 15070991GI: 30271926 Taxonomy ID: 227859
Virus Name: SARS coronavirusProduct size (PCR): 149 bp
MgCl2: mMdNTPs: mMType: Real-time PCR
Temp (PCR cycle):
Buffer:
Polymerase: Cycler:
Note: LightCycler-RNA Master hybridization probe
Forward(SarsF APNF) primer
Oligo type: Forward PrimerDegeneracy: 1
Target: 28538-28557Tm: 70C at salt 1000.0 mMLength:
Sequence: TGAATACACCCAAAGACCAC
(1 other experimental conditions)
Note:
Reverse(Sars APNR 6) primer
Oligo type: Reverse PrimerDegeneracy: 1
Target: 28686-28668Tm: 71.5C at salt 1000.0 mMLength:
Sequence: TGATGAGGAGCGAGAAGAG
(1 other experimental conditions)
Note: no common gi was found
Forward(Probe) primer
Oligo type: Hybridization ProbeDegeneracy: 1
Target: 28573-28595Tm: 75C at salt 1000.0 mMLength:
Sequence: CCTAATAACAATGCTGCCACCGT
(0 other experimental conditions)
Note: no common gi was found
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