A Simple Solution for Oligonucleotide Design

Click here for a list of viruses in the database


Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

Tm:
°C± °C
Oligo length:
bp± bp



PMID:

Common Data ID:

Taxonomy ID:

GI Number:


Common Data ID: HI0014 Virus: Bovine lymphotropic herpesvirus; BLHV
PMID: 9557713Publication date: 05/98 Type: Multiplex PCR
Temp: 94C 3min>65C 2min>72C 1min>(94C 30sec>63C 30sec>72C 15sec)*35
Primer Name: 556 Type of Usage: PCRTm: 80.6 C at salt 1000.0mM
Primer Name: 755 Type of Usage: PCRTm: 75.2 C at salt 1000.0mM

Common Data ID: HI0004 Virus: Bovine Lymphotropic Herpesvirus, BLHV
PMID: 9557713Publication date: 05/98 Type: Nested PCR
Temp: 94C 3min>60C 2min>72C 1min>(94C 30sec>46C 1min>72C 1min)*44
Primer Name: TGV Type of Usage: PCRTm: Max Tm 84.8 C Min Tm 77.8 C at salt 1000.0mM
Primer Name: IYG Type of Usage: PCRTm: Max Tm 80.4 C Min Tm 73.6 C at salt 1000.0mM
Primer Name: DFA Type of Usage: PCRTm: Max Tm 78.2 C Min Tm 63.8 C at salt 1000.0mM
Primer Name: ILK Type of Usage: PCRTm: Max Tm 86.4 C Min Tm 77.6 C at salt 1000.0mM
Primer Name: KG1 Type of Usage: PCRTm: Max Tm 83.7 C Min Tm 77.3 C at salt 1000.0mM
Primer Name:
Type of Usage:
Tm: 0 C

Common Data ID: HI0003 Virus: bovine lymphotropic herpesvirus, BLHV; Ovine herpesvirus 2, OHV2; Bovine herpesvirus 4, BHV4
PMID: 9557713Publication date: 05/98 Type: Nested PCR
Temp: 94C 3min>60C 2min>72C 1min>(94C 30sec>60C 60sec>72C 60sec)*35
Primer Name: 3'OHV2 Type of Usage: PCRTm: 80.4 C at salt 1000.0mM
Primer Name: ILK Type of Usage: PCRTm: Max Tm 86.4 C Min Tm 77.6 C at salt 1000.0mM
Primer Name: KG1 Type of Usage:
Tm: Max Tm 83.7 C Min Tm 77.3 C at salt 1000.0mM
Primer Name: TVG Type of Usage: PCRTm: Max Tm 84.7 C Min Tm 88.8 C at salt 1000.0mM
Primer Name: KG1 Type of Usage: PCRTm: Max Tm 83.7 C Min Tm 77.3 C at salt 1000.0mM
Primer Name: 3'BLHV Type of Usage: Tm: 80.3 C at salt 1000.0mM
Primer Name: 3'BHV4 Type of Usage: Tm: 73.2 C at salt 1000.0mM
Primer Name: DFA Type of Usage: Tm: Max Tm 78.2 C Min Tm 63.8 C at salt 1000.0mM

Common Data ID: HI0002 Virus: Bovine lymphotropic herpesvirus; BLHV
PMID: 9557713Publication date: 05/98 Type: Multiplex PCR
Temp: 94C 3min>65C 2min>72C 1min>(94C 30sec>63C 30sec>72C 15sec)*35
Primer Name: 3'LTR Type of Usage: PCRTm: 88.8 C at salt 1000.0mM
Primer Name: 5'BLHV Type of Usage: PCRTm: 74.1 C at salt 1000.0mM
Primer Name: 3'BLHV Type of Usage: PCRTm: 80.3 C at salt 1000.0mM
Primer Name: 5'BLHVP Type of Usage: PCRTm: 67.9 C at salt 1000.0mM
Primer Name: 3'BHV4 Type of Usage: PCRTm: 73.2 C at salt 1000.0mM
Primer Name: 5'BHV4 Type of Usage: PCRTm: 70 C at salt 1000.0mM
Primer Name: 3'BHV4 Type of Usage: PCRTm: 73.2 C at salt 1000.0mM
Primer Name: 5'ACT Type of Usage: PCRTm: 74.1 C at salt 1000.0mM
Primer Name: 3'ACT Type of Usage: PCRTm: 74.1 C at salt 1000.0mM
Primer Name: 5'LTR Type of Usage: PCRTm: 78.3 C at salt 1000.0mM

Total 26 Oligos
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