A Simple Solution for Oligonucleotide Design

Click here for a list of viruses in the database


Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

Tm:
°C± °C
Oligo length:
bp± bp



PMID:

Common Data ID:

Taxonomy ID:

GI Number:


Common Data ID: SK0026 Virus: influenza A virus (A/Stockholm/01/96(H1N1)); influenza A virus (A/Wuhan/359/95(H3N2)); influenza B virus (B/Sweden/2724/99)
PMID: 11136761Publication date: 01/01 Type: RT-Nested PCR 2
Temp: 95C 1min>(94C 30sec>62C 40sec>72C 40sec)*5>(94C 30sec>60C 40sec>72C 40sec)*5>(94C 30sec>58C 40sec>72C 40sec)*30>72C 5min
Primer Name: AH1B Type of Usage: Tm: 70 C at salt 1000.0mM
Primer Name: AH1E2 Type of Usage: Tm: 70 C at salt 1000.0mM
Primer Name: H3IF Type of Usage: Tm: 73.3 C at salt 1000.0mM
Primer Name: H3IR Type of Usage: Tm: 72 C at salt 1000.0mM
Primer Name: BIF Type of Usage: Tm: Max Tm 70.5 C Min Tm 64.6 C at salt 1000.0mM
Primer Name: BIR Type of Usage: Tm: Max Tm 73.7 C Min Tm 69.3 C at salt 1000.0mM

Common Data ID: SK0025 Virus: influenza A virus (A/Stockholm/01/96(H1N1)); influenza A virus (A/Wuhan/359/95(H3N2)); influenza B virus (B/Sweden/2724/99)
PMID: 11136761Publication date: 01/01 Type: RT-Nested PCR 1
Temp: 37C 2min>58C 30min>94C 2min>(94C 30sec>62C 40sec>72C 40sec)*5>(94C 30sec>60C 40sec>72C 40sec)*5>(94C 30sec>58C 40sec>72C 40sec)*30>72C 5min
Primer Name: AH1A Type of Usage: Tm: Max Tm 67.9 C Min Tm 65.8 C at salt 1000.0mM
Primer Name: AH1R Type of Usage: Tm: 56 C
Primer Name: H3OF Type of Usage: Tm: Max Tm 72.5 C Min Tm 66.6 C at salt 1000.0mM
Primer Name: H3OR Type of Usage: Tm: Max Tm 69.7 C Min Tm 67.9 C at salt 1000.0mM
Primer Name: BOF Type of Usage: Tm: Max Tm 72.5 C Min Tm 68.5 C at salt 1000.0mM
Primer Name: BOR Type of Usage: Tm: Max Tm 67.2 C Min Tm 62.9 C at salt 1000.0mM

Total 12 Oligos
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