VirOligo Search

A Simple Solution for Oligonucleotide Design

Click here for a list of viruses in the database Two search options: 1. Search by virus name and/or primer data 2. Search by PMID, VirOligoID, or taxonomy ID; Virus name: Oligo Sequence: Tm: °C± °C Oligo length: bp± bp PMID: Common Data ID: Taxonomy ID: GI Number:
	Total 19 Oligos

	Common Data ID: SG0031	Virus: Yellow fever virus
	PMID: 12089242	Publication date:07/02	Type: RT-PCR
	Temp: 95C 300sec>(95C 5sec>60C 5sec[-1C/cyc]>72C 25sec)10>(95C 5sec>56C 10sec>72C 30sec)40

	Primer Name: YFS	Type of Usage: Forward Primer	Tm: 73.9C at salt 1000.0 mM
	Primer Name: YFV	Type of Usage: Reverse Primer	Tm: 74.4C at salt 1000.0 mM
	Primer Name: YFP	Type of Usage: PCR Probe	Tm: 75C at salt 1000.0 mM

	Common Data ID: SG0038	Virus: Yellow fever virus
	PMID: 12376973	Publication date:12/02	Type: RT-PCR
	Temp: 95C 300sec>(95C 30sec>53C 90sec>72C 60sec)*30>72C 600sec

	Primer Name: VD8	Type of Usage: Reverse Primer	Tm: 74.1C at salt 1000.0 mM
	Primer Name: EMF1	Type of Usage: Forward Primer	Tm: 74.4C at salt 1000.0 mM
	Primer Name: NS5YF	Type of Usage: Forward Primer	Tm: 70C at salt 1000.0 mM

	Common Data ID: SH0021	Virus: Yellow fever virus
	PMID: 9365884	Publication date:11/97	Type: Semi-nested PCR
	Temp: 95C 300sec>(95C 30sec>53C 90sec>72C 60sec)*30>72C 600sec

	Primer Name: VD8	Type of Usage: Reverse Primer	Tm: 74.1C at salt 1000.0 mM
	Primer Name: EMF1	Type of Usage: Forward Primer	Tm: 74.4C at salt 1000.0 mM
	Primer Name: NS5YF	Type of Usage: Forward Primer	Tm: 70C at salt 1000.0 mM

	Common Data ID: YS0012	Virus: Yellow fever virus
	PMID: 14624234	Publication date:11/17/2003	Type: Hybridization
	Temp:

	Primer Name: 10001691	Type of Usage:	Tm: 89.33C at salt 1000.0 mM
	Primer Name: 10001692	Type of Usage:	Tm: 89.33C at salt 1000.0 mM
	Primer Name: 10001693	Type of Usage:	Tm: 91.67C at salt 1000.0 mM
	Primer Name: 10001694	Type of Usage:	Tm: 91.67C at salt 1000.0 mM
	Primer Name: 10001695	Type of Usage:	Tm: 95.19C at salt 1000.0 mM
	Primer Name: 10001696	Type of Usage:	Tm: 95.19C at salt 1000.0 mM
	Primer Name: 10001697	Type of Usage:	Tm: 93.43C at salt 1000.0 mM
	Primer Name: 10001698	Type of Usage:	Tm: 93.43C at salt 1000.0 mM
	Primer Name: 10001699	Type of Usage:	Tm: 94.6C at salt 1000.0 mM
	Primer Name: 10001700	Type of Usage:	Tm: 94.6C at salt 1000.0 mM

	Total 19 Oligos