A Simple Solution for Oligonucleotide Design



Click here for a list of viruses in the database


Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

Tm:
°C± °C
Oligo length:
bp± bp



PMID:

Common Data ID:

Taxonomy ID:

GI Number:

Total 25 Oligos

Common Data ID: MP0113 Virus: Hepatitis A virus (STRAIN HM-175), HAV
PMID: 8031088Publication date:03/94 Type: AC-PCR
Temp: (95C 1min>60C 1min)*35>60C 7min
Primer Name: HAV primer 1 Type of Usage: PCRTm: 75.8 C at salt 1000.0mM
Primer Name: HAV primer 2 Type of Usage: PCRTm: 73.9 C at salt 1000.0mM

Common Data ID: MP0114 Virus: Hepatitis A virus (STRAIN HM-175), HAV
PMID: 8031088Publication date:03/94 Type: RT-PCR
Temp: (95C 1min>60C 1min)*35>60C 7min
Primer Name: HAV primer 1 Type of Usage: Tm: 75.8 C at salt 1000.0mM
Primer Name: HAV primer 2 Type of Usage: Tm: 73.9 C at salt 1000.0mM
Primer Name: MP01141 Type of Usage: PCR ProbeTm: 65.8 C at salt 1000.0mM

Common Data ID: YS0012 Virus: Hepatitis A virus
PMID: 14624234Publication date:11/17/2003 Type: Hybridization
Temp:
Primer Name: 20001164 Type of Usage: Tm: 81.71C at salt 1000.0 mM
Primer Name: 20001166 Type of Usage: Tm: 86.4C at salt 1000.0 mM
Primer Name: 20001167 Type of Usage: Tm: 85.23C at salt 1000.0 mM
Primer Name: 20001168 Type of Usage: Tm: 84.64C at salt 1000.0 mM
Primer Name: 20001170 Type of Usage: Tm: 88.16C at salt 1000.0 mM
Primer Name: 10002517 Type of Usage: Tm: 86.99C at salt 1000.0 mM
Primer Name: 10002518 Type of Usage: Tm: 86.99C at salt 1000.0 mM
Primer Name: 10002519 Type of Usage: Tm: 86.4C at salt 1000.0 mM
Primer Name: 10002520 Type of Usage: Tm: 86.4C at salt 1000.0 mM
Primer Name: 10002521 Type of Usage: Tm: 99.29C at salt 1000.0 mM
Primer Name: 10002522 Type of Usage: Tm: 99.29C at salt 1000.0 mM
Primer Name: 10002523 Type of Usage: Tm: 90.5C at salt 1000.0 mM
Primer Name: 10002524 Type of Usage: Tm: 90.5C at salt 1000.0 mM
Primer Name: 10002525 Type of Usage: Tm: 96.36C at salt 1000.0 mM
Primer Name: 10002526 Type of Usage: Tm: 96.36C at salt 1000.0 mM
Primer Name: 20000781 Type of Usage: Tm: 81.71C at salt 1000.0 mM
Primer Name: 20000782 Type of Usage: Tm: 85.23C at salt 1000.0 mM
Primer Name: 20000783 Type of Usage: Tm: 84.64C at salt 1000.0 mM
Primer Name: 20000784 Type of Usage: Tm: 86.4C at salt 1000.0 mM
Primer Name: 20000785 Type of Usage: Tm: 88.16C at salt 1000.0 mM

Total 25 Oligos
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