A Simple Solution for Oligonucleotide Design



Click here for a list of viruses in the database


Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

Tm:
°C± °C
Oligo length:
bp± bp



PMID:

Common Data ID:

Taxonomy ID:

GI Number:

Total 26 Oligos

Common Data ID: BM1363 Virus: Tobacco mosaic virus
PMID: 9779616Publication date:10/98 Type: RT-PCR
Temp: 42C 45min>92C 2min>(92C 30sec>58C 30sec>72C 60sec)*35>72C 10min
Primer Name: TMV1 Type of Usage: PCR forwardTm: 73.9 C at salt 1000.0mM
Primer Name: TMV2 Type of Usage: PCR reverseTm: 78.5 C at salt 1000.0mM

Common Data ID: BM1368 Virus: Tobacco mosaic virus
PMID: 7510437Publication date:04/94 Type: RT-PCR
Temp: 94C 3min>55C 1min>72C 1min>(94C 30sec>55C 30sec>72C 40sec)*40
Primer Name: PB00968 Type of Usage: Tm: 72.6 C at salt 1000.0mM
Primer Name: PB00969 Type of Usage: Tm: 52 C
Primer Name: PB00970 Type of Usage: Tm: 50 C
Primer Name: PB00971 Type of Usage: Tm: 50 C
Primer Name: PB00972 Type of Usage: Tm: 52 C
Primer Name: PB00973 Type of Usage: Tm: 56 C
Primer Name: PB00974 Type of Usage: Tm: 50 C
Primer Name: PB00975 Type of Usage: Tm: 54 C

Common Data ID: BM1372 Virus: Tobacco mosaic virus
PMID: 1516709Publication date:09/92 Type: RT-PCR
Temp: (94C 1min>58C 1min>72C 3min)*30
Primer Name: PB00980 Type of Usage: Tm: 74.4 C at salt 1000.0mM
Primer Name: PB00981 Type of Usage: Tm: 82.2 C at salt 1000.0mM

Common Data ID: BM1373 Virus: Tobacco mosaic virus
PMID: 1516709Publication date:09/92 Type: RT-PCR
Temp: 94C 3min>58C 2min>70C 5min>(94C 35sec>58C 35sec>70C 45sec)*29>94C 1min>58C 2min>70C 11min
Primer Name: PB00980 Type of Usage: Tm: 74.4 C at salt 1000.0mM
Primer Name: PB00981 Type of Usage: Tm: 82.2 C at salt 1000.0mM

Common Data ID: BM1377 Virus: Tobacco mosaic virus
PMID: 8602148Publication date:02/96 Type: RT-PCR
Temp: (95C 15sec>50C 30sec>72C 60sec)*20
Primer Name: 1 Type of Usage: Tm: 72 C at salt 1000.0mM
Primer Name: 2 Type of Usage: Tm: 61.8 C at salt 1000.0mM

Common Data ID: YS0012 Virus: Tobacco mosaic virus
PMID: 14624234Publication date:11/17/2003 Type: Hybridization
Temp:
Primer Name: 10003031 Type of Usage: Tm: 91.67C at salt 1000.0 mM
Primer Name: 10003032 Type of Usage: Tm: 91.67C at salt 1000.0 mM
Primer Name: 10003033 Type of Usage: Tm: 85.23C at salt 1000.0 mM
Primer Name: 10003034 Type of Usage: Tm: 85.23C at salt 1000.0 mM
Primer Name: 10003035 Type of Usage: Tm: 88.74C at salt 1000.0 mM
Primer Name: 10003036 Type of Usage: Tm: 88.74C at salt 1000.0 mM
Primer Name: 10003037 Type of Usage: Tm: 89.33C at salt 1000.0 mM
Primer Name: 10003038 Type of Usage: Tm: 89.33C at salt 1000.0 mM
Primer Name: 10003039 Type of Usage: Tm: 96.94C at salt 1000.0 mM
Primer Name: 10003040 Type of Usage: Tm: 96.94C at salt 1000.0 mM

Total 26 Oligos
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