A Simple Solution for Oligonucleotide Design



Click here for a list of viruses in the database


Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

Tm:
°C± °C
Oligo length:
bp± bp



PMID:

Common Data ID:

Taxonomy ID:

GI Number:

Total 16 Oligos

Common Data ID: BM0216 Virus: Influenza B virus (B/Christ Hospital/112/82)
PMID: 8227277Publication date:09/93 Type: RT-nested PCR 2
Temp: (94C 30sec>55C 30sec>72C 60sec)*30
Primer Name: B/403 Type of Usage: Tm: 66.6 C at salt 1000.0mM
Primer Name: B/961 Type of Usage: Tm: 73.9 C at salt 1000.0mM

Common Data ID: BM0245 Virus: Influenza B virus (B/Seal/Netherlands/1/99)
PMID: 10807575Publication date:05/00 Type: RT-PCR
Temp: 42C 30min>95C 3min>(95C 1min>45C 1min>72C 3min)*40
Primer Name: Pi Type of Usage: Tm: 63.8 C at salt 1000.0mM
Primer Name: P4 Type of Usage: Tm: 72 C at salt 1000.0mM
Primer Name: P3 Type of Usage: Tm: 70 C at salt 1000.0mM
Primer Name: P6 Type of Usage: Tm: 70 C at salt 1000.0mM

Common Data ID: MP0219 Virus: Influenza B virus
PMID: 9738055Publication date:11/01 Type: RT-Nested PCR 1
Temp: 94C 2min>(94C 1min>50C 1min>72C 1min)*35
Primer Name: BHA A Type of Usage: PCRTm: 72 C at salt 1000.0mM
Primer Name: BHA DII Type of Usage: PCRTm: 70 C at salt 1000.0mM

Common Data ID: MP0220 Virus: Influenza B virus
PMID: 9738055Publication date:11/01 Type: RT-Nested PCR 2
Temp: 94C 2min>(94C 1min>60C 1min>72C 1min)*35
Primer Name: BHA B Type of Usage: PCRTm: 65.8 C at salt 1000.0mM
Primer Name: BHA CII Type of Usage: PCRTm: 74.1 C at salt 1000.0mM

Common Data ID: YS0012 Virus: Influenza B virus
PMID: 14624234Publication date:11/17/2003 Type: Hybridization
Temp:
Primer Name: 20001087 Type of Usage: Tm: 95.19C at salt 1000.0 mM
Primer Name: 20001088 Type of Usage: Tm: 91.09C at salt 1000.0 mM
Primer Name: 20001089 Type of Usage: Tm: 92.26C at salt 1000.0 mM
Primer Name: 20001470 Type of Usage: Tm: 92.26C at salt 1000.0 mM
Primer Name: 20001472 Type of Usage: Tm: 95.19C at salt 1000.0 mM
Primer Name: 20001473 Type of Usage: Tm: 91.09C at salt 1000.0 mM

Total 16 Oligos
Copyright © 2001-2005 VirOligo Database Project. All rights reserved Feedback is welcome. Contact webmaster Yan Song at ysong@okstate.edu.