A Simple Solution for Oligonucleotide Design



Click here for a list of viruses in the database


Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

Tm:
°C± °C
Oligo length:
bp± bp



PMID:

Common Data ID:

Taxonomy ID:

GI Number:

Total 22 Oligos

Common Data ID: BH0067 Virus: Influenza A virus (STRAIN A/PUERTO RICO/8/34)
PMID: 7937799Publication date:09/94 Type: PCR
Temp: 94C 4min>(94C 1min>50C 2min>72C 3min)*32>72C 7min
Primer Name: PA00051 Type of Usage: Tm: 69.3 C at salt 1000.0mM
Primer Name: PA00052 Type of Usage: Tm: 71 C at salt 1000.0mM

Common Data ID: BM0538 Virus: Influenza A virus (STRAIN A/PUERTO RICO/8/34); influenza A virus (A/duck/Alberta/35/76(H1N1))
PMID: 9065404Publication date:03/97 Type: RT-PCR
Temp: 94C 9min>(94C 30sec>50C 30sec>72C 30sec)*40>72C 5min
Primer Name: PD00368 Type of Usage: Tm: Max Tm 76.1 C Min Tm 70 C at salt 1000.0mM
Primer Name: PD00369 Type of Usage: Tm: Max Tm 74.1 C Min Tm 63.8 C at salt 1000.0mM
Primer Name: PD00370 Type of Usage: Tm: Max Tm 80.2 C Min Tm 70 C at salt 1000.0mM
Primer Name: PD00371 Type of Usage: Tm: Max Tm 71.5 C Min Tm 60.7 C at salt 1000.0mM
Primer Name: PD00372 Type of Usage: Tm: Max Tm 76.1 C Min Tm 72 C at salt 1000.0mM
Primer Name: PD00373 Type of Usage: Tm: 76.1 C at salt 1000.0mM
Primer Name: PD00374 Type of Usage: Tm: 50 C
Primer Name: PD00375 Type of Usage: Tm: Max Tm 54 C Min Tm 52 C

Common Data ID: YS0012 Virus: Influenza A virus
PMID: 14624234Publication date:11/17/2003 Type: Hybridization
Temp:
Primer Name: 20001086 Type of Usage: Tm: 91.67C at salt 1000.0 mM
Primer Name: 20001091 Type of Usage: Tm: 87.57C at salt 1000.0 mM
Primer Name: 20001092 Type of Usage: Tm: 94.01C at salt 1000.0 mM
Primer Name: 20001471 Type of Usage: Tm: 91.67C at salt 1000.0 mM
Primer Name: 20001474 Type of Usage: Tm: 94.01C at salt 1000.0 mM
Primer Name: 20001477 Type of Usage: Tm: 87.57C at salt 1000.0 mM
Primer Name: 10001919 Type of Usage: Tm: 93.43C at salt 1000.0 mM
Primer Name: 10001920 Type of Usage: Tm: 93.43C at salt 1000.0 mM
Primer Name: 10001921 Type of Usage: Tm: 93.43C at salt 1000.0 mM
Primer Name: 10001922 Type of Usage: Tm: 93.43C at salt 1000.0 mM
Primer Name: 10001923 Type of Usage: Tm: 91.67C at salt 1000.0 mM
Primer Name: 10001924 Type of Usage: Tm: 91.67C at salt 1000.0 mM

Total 22 Oligos
Copyright © 2001-2005 VirOligo Database Project. All rights reserved Feedback is welcome. Contact webmaster Yan Song at ysong@okstate.edu.