A Simple Solution for Oligonucleotide Design



Click here for a list of viruses in the database


Two search options:
1. Search by virus name and/or primer data
2. Search by PMID, VirOligoID, or taxonomy ID;

Virus name:

Oligo Sequence:

Tm:
°C± °C
Oligo length:
bp± bp



PMID:

Common Data ID:

Taxonomy ID:

GI Number:

Total 27 Oligos

Common Data ID: BM0086 Virus: Influenza A virus (STRAIN A/TAIWAN/1/86); influenza A virus (A/BANGKOK/1/79)
PMID: 9774990Publication date:05/95 Type: RT-PCR
Temp: (94C 1min>55C 2min>72C 3min)*25
Primer Name: A Type of Usage: Tm: 72 C at salt 1000.0mM
Primer Name: B Type of Usage: Tm: 63.8 C at salt 1000.0mM
Primer Name: HK-1 Type of Usage: Tm: 65.8 C at salt 1000.0mM
Primer Name: HK-2 Type of Usage: Tm: 78.2 C at salt 1000.0mM

Common Data ID: BM0123 Virus: Influenza A virus (A/Massachusetts/1/90); Influenza A virus (A/France/15/88); Influenza A virus (A/Goroka/2/90); Influenza A virus (A/Qingdao/28/91)
PMID: 8493812Publication date:04/93 Type: RT-PCR
Temp: 94C 7min>(94C 1min>50C 2min>72C 3min)*25
Primer Name: 6 Type of Usage: Tm: 48 C
Primer Name: 1193 Type of Usage: Tm: 52 C

Common Data ID: BM0539 Virus: Influenza A virus (STRAIN A/PUERTO RICO/8/34); influenza A virus (A/duck/Alberta/35/76(H1N1))
PMID: 9065404Publication date:03/97 Type: RT-PCR
Temp: 94C 9min>(94C 30sec>50C 30sec>72C 30sec)*40>72C 5min
Primer Name: PD00359 Type of Usage: Tm: Max Tm 72.5 C Min Tm 68.5 C at salt 1000.0mM
Primer Name: PD00360 Type of Usage: Tm: Max Tm 78.6 C Min Tm 69.7 C at salt 1000.0mM
Primer Name: PD00361 Type of Usage: Tm: 71 C at salt 1000.0mM
Primer Name: PD00362 Type of Usage: Tm: Max Tm 74.4 C Min Tm 68.5 C at salt 1000.0mM
Primer Name: PD00363 Type of Usage: Tm: Max Tm 70 C Min Tm 65.8 C at salt 1000.0mM
Primer Name: PD00364 Type of Usage: Tm: Max Tm 72 C Min Tm 67.9 C at salt 1000.0mM
Primer Name: PD00365 Type of Usage: Tm: Max Tm 72 C Min Tm 70 C at salt 1000.0mM
Primer Name: PD00366 Type of Usage: Tm: Max Tm 65.8 C Min Tm 59.7 C at salt 1000.0mM
Primer Name: PD00367 Type of Usage: Tm: Max Tm 76.6 C Min Tm 65.4 C at salt 1000.0mM

Common Data ID: MP0148 Virus: Influenza A virus (STRAIN A/PUERTO RICO/8/34)
PMID: 1457106Publication date:06/92 Type: RT-Nested PCR 1
Temp: (94C 30sec>55C 30sec>72C 60sec)*30
Primer Name: A/5/1 Type of Usage: Tm: 72.3 C at salt 1000.0mM
Primer Name: A/1117/2 Type of Usage: Tm: 77.3 C at salt 1000.0mM

Common Data ID: MP0212 Virus: Influenza A virus (Strain WSN)
PMID: 2349225Publication date:06/90 Type: RT-PCR
Temp: (94C 1min>35C 2min>72C 2min)*25
Primer Name: Primer I Type of Usage: Tm: 36 C
Primer Name: Primer II Type of Usage: Tm: 36 C

Common Data ID: MP0213 Virus: Influenza A virus (Strain WSN)
PMID: 2349225Publication date:06/90 Type: RT-PCR
Temp: (94C 1min>35C 2min>72C 2min)*25
Primer Name: Primer I Type of Usage: Tm: 36 C
Primer Name: Primer IV Type of Usage: Tm: 71.5 C at salt 1000.0mM

Common Data ID: YS0012 Virus: Influenza A virus
PMID: 14624234Publication date:11/17/2003 Type: Hybridization
Temp:
Primer Name: 20001090 Type of Usage: Tm: 88.74C at salt 1000.0 mM
Primer Name: 20001093 Type of Usage: Tm: 84.64C at salt 1000.0 mM
Primer Name: 20001094 Type of Usage: Tm: 86.4C at salt 1000.0 mM
Primer Name: 20001475 Type of Usage: Tm: 86.4C at salt 1000.0 mM
Primer Name: 20001476 Type of Usage: Tm: 88.74C at salt 1000.0 mM
Primer Name: 20001478 Type of Usage: Tm: 84.64C at salt 1000.0 mM

Total 27 Oligos
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